RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 HKR1P10072 659 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 TMEM187Q14656 261 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 SPATA46Q5T0L3 261 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 RPL7L1Q6DKI1 246 aaKnown RBP12.09□□□□□ -0.47
UBXN11-214ENST00000475591 APOBEC3DQ96AK3 386 aaPredicted RBP12.09□□□□□ -0.47
UBXN11-214ENST00000475591 NARS2Q96I59 477 aaKnown RBP12.09□□□□□ -0.47
UBXN11-214ENST00000475591 CNTNAP3BQ96NU0 1288 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 TECTBQ96PL2 329 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 CNTNAP3Q9BZ76 1288 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 ZNF806P0C7X5 589 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 CTAG1AP78358 180 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 TSC22D1Q15714 1073 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 CEACAM21Q3KPI0 293 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 ZFP62Q8NB50 900 aaPredicted RBP12.09□□□□□ -0.47
UBXN11-214ENST00000475591 GPHA2Q96T91 129 aa12.09□□□□□ -0.47
UBXN11-214ENST00000475591 A0A1W2PR80 420 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 TSPAN4O14817 238 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 FGF16O43320 207 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 SS18L1O75177 396 aaPredicted RBP12.08□□□□□ -0.48
UBXN11-214ENST00000475591 WISP2O76076 250 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 ARG2P78540 354 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 RNPS1Q15287 305 aaKnown RBP12.08□□□□□ -0.48
UBXN11-214ENST00000475591 WDYHV1Q96HA8 205 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 SMIM3Q9BZL3 60 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 DNTTIP1Q9H147 329 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 ZC4H2Q9NQZ6 224 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 PCNX2A6NKB5 2137 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 ARHGAP21Q5T5U3 1957 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 A0A1B0GW55 424 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 CD300LBA8K4G0 201 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 DIRAS3O95661 229 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 DUX4L2P0CJ85 424 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 DUX4L3P0CJ86 424 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 DUX4L4P0CJ87 422 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 DUX4L5P0CJ88 424 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 DUX4L6P0CJ89 424 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 DUX4L7P0CJ90 424 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 PET100P0DJ07 73 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 COX5BP10606 129 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 CD46P15529 392 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 SRSF3P84103 164 aaKnown RBP12.08□□□□□ -0.48
UBXN11-214ENST00000475591 TRIP6Q15654 476 aaKnown RBP12.08□□□□□ -0.48
UBXN11-214ENST00000475591 ZNF766Q5HY98 468 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 MYPOPQ86VE0 399 aaPredicted RBP12.08□□□□□ -0.48
UBXN11-214ENST00000475591 LHFPL5Q8TAF8 219 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 MOB3AQ96BX8 217 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 DUX4Q9UBX2 424 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 MEMO1Q9Y316 297 aa12.08□□□□□ -0.48
UBXN11-214ENST00000475591 LRP3O75074 770 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 FAM157CP0CG43 387 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 ARR3P36575 388 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 NAAAQ02083 359 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 TMEM211Q6ICI0 200 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 HAGHLQ6PII5 290 aaPredicted RBP12.07□□□□□ -0.48
UBXN11-214ENST00000475591 GLYATL2Q8WU03 294 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 BSCL2Q96G97 398 aaPredicted RBP12.07□□□□□ -0.48
UBXN11-214ENST00000475591 RNF122Q9H9V4 155 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 TUBD1Q9UJT1 453 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 KCNIP3Q9Y2W7 256 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 LAMA5O15230 3695 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 BET1O15155 118 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 DEDDO75618 318 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 ACTL6AO96019 429 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 CST4P01036 141 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 PPYP01298 95 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 IFNA21P01568 189 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 SCTP09683 121 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 IL32P24001 234 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 RPL12P30050 165 aaKnown RBP12.07□□□□□ -0.48
UBXN11-214ENST00000475591 FGF12P61328 243 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 DEFA5Q01523 94 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 PLP2Q04941 152 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 MDP1Q86V88 176 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 C17orf78Q8N4C9 275 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 Q8NFD4 153 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 MARC2Q969Z3 335 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 TP53RKQ96S44 253 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 PCDHB16Q9NRJ7 776 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 TMEM100Q9NV29 134 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 DNAJB11Q9UBS4 358 aa12.07□□□□□ -0.48
UBXN11-214ENST00000475591 TRGV5A0A0B4J1U4 118 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 PHF1O43189 567 aaPredicted RBP12.06□□□□□ -0.48
UBXN11-214ENST00000475591 MBPP02686 304 aaPredicted RBP12.06□□□□□ -0.48
UBXN11-214ENST00000475591 CELA3BP08861 270 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 FOSL1P15407 271 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 GLP1RP43220 463 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 HERV-K104P61576 105 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 OR2T2Q6IF00 324 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 OR52M1Q8NGK5 317 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 OR1K1Q8NGR3 316 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 NEK7Q8TDX7 302 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 WNT2BQ93097 391 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 MSI2Q96DH6 328 aaKnown RBP12.06□□□□□ -0.48
UBXN11-214ENST00000475591 IP6K3Q96PC2 410 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 SLC22A20A6NK97 555 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 NKX2-8O15522 239 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 PRKACAP17612 351 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 APLNRP35414 380 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 CLN3Q13286 438 aa12.06□□□□□ -0.48
UBXN11-214ENST00000475591 STK11Q15831 433 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms