RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 CHST4Q8NCG5 386 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 OR4D6Q8NGJ1 314 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 ST8SIA4Q92187 359 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 BEX2Q9BXY8 128 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 METTL9Q9H1A3 318 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 UNKLQ9H9P5 680 aaKnown RBP13.97□□□□□ -0.17
SCAF11-206ENST00000474828 KPTNQ9Y664 436 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 AUP1Q9Y679 476 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 SH2D1BO14796 132 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 SLC22A1O15245 554 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 PSPNO60542 156 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 CDRT1O95170 752 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 PSMB9P28065 219 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 ERP29P30040 261 aaKnown RBP13.96□□□□□ -0.17
SCAF11-206ENST00000474828 GPR176Q14439 515 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 KLF17Q5JT82 389 aaPredicted RBP13.96□□□□□ -0.17
SCAF11-206ENST00000474828 LINC00596Q86U02 117 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 OR5D13Q8NGL4 314 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 SLC25A28Q96A46 364 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 MRI1Q9BV20 369 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 PCDHB16Q9NRJ7 776 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 OR14J1Q9UGF5 321 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 GLS2Q9UI32 602 aa13.96□□□□□ -0.17
SCAF11-206ENST00000474828 A0A0G2JK05 382 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 OR2H2O95918 312 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 UBBP0CG47 229 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 OR3A1P47881 315 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 RSU1Q15404 277 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 GLT8D1Q68CQ7 371 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 JAGN1Q8N5M9 183 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 TMEM185AQ8NFB2 350 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 NKX3-1Q99801 234 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-206ENST00000474828 SLITRK2Q9H156 845 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 NCOR1P1Q9H4R4 102 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 EXOSC4Q9NPD3 245 aaKnown RBP13.95□□□□□ -0.18
SCAF11-206ENST00000474828 STUB1Q9UNE7 303 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 GSTK1Q9Y2Q3 226 aa13.95□□□□□ -0.18
SCAF11-206ENST00000474828 MRPS28Q9Y2Q9 187 aaKnown RBP13.95□□□□□ -0.18
SCAF11-206ENST00000474828 SHISA3A0PJX4 238 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 M0R1W7 72 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 SLC33A1O00400 549 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-206ENST00000474828 CALRP27797 417 aaKnown RBP13.94□□□□□ -0.18
SCAF11-206ENST00000474828 DUSP1P28562 367 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 RBM11P57052 281 aaKnown RBP13.94□□□□□ -0.18
SCAF11-206ENST00000474828 QRFPP83859 136 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 MEF2CQ06413 473 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-206ENST00000474828 METAP1DQ6UB28 335 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-206ENST00000474828 GLIPR1L1Q6UWM5 242 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 C9orf139Q6ZV77 190 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 OSR2Q8N2R0 312 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 C11orf42Q8N5U0 333 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 Q8N7P7 452 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 NANPQ8TBE9 248 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 WDFY2Q96P53 400 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 TBX15Q96SF7 602 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 FBLN5Q9UBX5 448 aa13.94□□□□□ -0.18
SCAF11-206ENST00000474828 WNK2Q9Y3S1 2297 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 TRAV24A0A0B4J272 114 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A10PA6NDY2 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A18PA6NE21 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A16PA6NEW6 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A20PA6NIJ5 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A8PA6NJQ4 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A7PA6NKC0 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A22PA8MWA6 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A12PA8MX19 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A5PA8MXJ8 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A23PA8MXZ1 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 SLC17A2O00624 439 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 MGST3O14880 152 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A15PP0C7V4 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A13PP0C7W8 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A14PP0C7W9 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM90A24PP0C7X0 464 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 SMIM18P0DKX4 95 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 CALCBP10092 127 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 GTF2F2P13984 249 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 NDUFB7P17568 137 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 SRD5A1P18405 259 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 PSMD7P51665 324 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 CAPZA1P52907 286 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 DLX6P56179 175 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 BPIFB3P59826 476 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 NEDD8Q15843 81 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 MPV17LQ2QL34 196 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 TMEM200BQ69YZ2 307 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 IL17RELQ6ZVW7 336 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 OR4S1Q8NGB4 309 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 OR6M1Q8NGM8 313 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 OR10K1Q8NGX5 313 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 TNFRSF14Q92956 283 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 FAM192AQ9GZU8 254 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 ELL3Q9HB65 397 aaPredicted RBP13.93□□□□□ -0.18
SCAF11-206ENST00000474828 C19orf12Q9NSK7 152 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 TXNL4BQ9NX01 149 aaKnown RBP13.93□□□□□ -0.18
SCAF11-206ENST00000474828 RCC2Q9P258 522 aaKnown RBP13.93□□□□□ -0.18
SCAF11-206ENST00000474828 ING4Q9UNL4 249 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 ST3GAL6Q9Y274 331 aa13.93□□□□□ -0.18
SCAF11-206ENST00000474828 A0A1W2PP11 408 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 HTR3BO95264 441 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms