RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ADI1Q9BV57 179 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 LIN7BQ9HAP6 207 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 MTCH1Q9NZJ7 389 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 SLC7A11Q9UPY5 501 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 LINC00312Q9Y6C7 94 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 R4GMQ9 66 aa11.18□□□□□ -0.62
CCDC78-209ENST00000474647 LOC100130705A0A1B0GUX0 176 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 TMEM82A0PJX8 343 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 FAM90A22PA8MWA6 464 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 SRSF10O75494 262 aaKnown RBP11.17□□□□□ -0.62
CCDC78-209ENST00000474647 HAND1O96004 215 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 HSPA13P48723 471 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 ARHGDIBP52566 201 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 SNU13P55769 128 aaKnown RBP11.17□□□□□ -0.62
CCDC78-209ENST00000474647 CDC42P60953 191 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 ADARB1P78563 741 aaKnown RBP11.17□□□□□ -0.62
CCDC78-209ENST00000474647 PRAMEF5Q5TYX0 476 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 ZNF322Q6U7Q0 402 aaPredicted RBP11.17□□□□□ -0.62
CCDC78-209ENST00000474647 ELMOD2Q8IZ81 293 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 DHRSXQ8N5I4 330 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 ZNF555Q8NEP9 628 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 OR4P4Q8NGL7 312 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 IL36RNQ9UBH0 155 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 GMPPBQ9Y5P6 360 aa11.17□□□□□ -0.62
CCDC78-209ENST00000474647 A0A1B0GTI1 187 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 MMP23AO75900 390 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 RPP14O95059 124 aaKnown RBP11.16□□□□□ -0.62
CCDC78-209ENST00000474647 CCDC159P0C7I6 412 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 BRS3P32247 399 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 CAPGP40121 348 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 EGFEM1PQ0D2K5 195 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 TTC23Q5W5X9 447 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 BAIAP2L2Q6UXY1 529 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 SLC25A26Q70HW3 274 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 EGFL6Q8IUX8 553 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 SLC35F2Q8IXU6 374 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 LINC00482Q8N8I6 264 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 CYGBQ8WWM9 190 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 B9D2Q9BPU9 175 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 GPR61Q9BZJ8 451 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 SNX5Q9Y5X3 404 aa11.16□□□□□ -0.62
CCDC78-209ENST00000474647 IGKV1-27A0A075B6S5 117 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 DHRS7CA6NNS2 312 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 M0R129 80 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 PRKYO43930 277 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 CALCBP10092 127 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 DUSP1P28562 367 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 EFNB1P98172 346 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 ZNF691Q5VV52 312 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 ABHD12Q8N2K0 398 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 OR51D1Q8NGF3 324 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 OR52N4Q8NGI2 321 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 TFAP2CQ92754 450 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 BORCS8Q96FH0 119 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 ZNF184Q99676 751 aaPredicted RBP11.15□□□□□ -0.62
CCDC78-209ENST00000474647 RBFOX1Q9NWB1 397 aaKnown RBP11.15□□□□□ -0.62
CCDC78-209ENST00000474647 DPM3Q9P2X0 92 aa11.15□□□□□ -0.62
CCDC78-209ENST00000474647 ZNF670-ZNF695F2Z2N8 137 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 SYT7O43581 403 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 PSPNO60542 156 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 GATBO75879 557 aaKnown RBP11.14□□□□□ -0.63
CCDC78-209ENST00000474647 OR2F2O95006 317 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 ZNF91Q05481 1191 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 UBE2V2Q15819 145 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 BCDIN3DQ7Z5W3 292 aaKnown RBP11.14□□□□□ -0.63
CCDC78-209ENST00000474647 MRPL41Q8IXM3 137 aaKnown RBP11.14□□□□□ -0.63
CCDC78-209ENST00000474647 ENTHD1Q8IYW4 607 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 TCEANCQ8N8B7 351 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 YIPF7Q8N8F6 280 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 OR8J1Q8NGP2 316 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 ZNF596Q8TC21 504 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 TMEM163Q8TC26 289 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 TRUB1Q8WWH5 349 aaKnown RBP11.14□□□□□ -0.63
CCDC78-209ENST00000474647 RBM14Q96PK6 669 aaKnown RBP11.14□□□□□ -0.63
CCDC78-209ENST00000474647 TBX5Q99593 518 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 GAL3ST2Q9H3Q3 398 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 IMPAD1Q9NX62 359 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 GLS2Q9UI32 602 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 MRM2Q9UI43 246 aaKnown RBP11.14□□□□□ -0.63
CCDC78-209ENST00000474647 RAB26Q9ULW5 256 aa11.14□□□□□ -0.63
CCDC78-209ENST00000474647 UBE2J1Q9Y385 318 aaPredicted RBP11.14□□□□□ -0.63
CCDC78-209ENST00000474647 TRGV10A0A0A0MS01 117 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 NUDT19A8MXV4 375 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 LEUTXA8MZ59 168 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 SIRPB1O00241 398 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 MGST3O14880 152 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 CYB5AP00167 134 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 AMY1AP04745 511 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 AMY2AP04746 511 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 PRKACAP17612 351 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 GABRB1P18505 474 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 BCL3P20749 454 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 CCL1P22362 96 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 CDK2P24941 298 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 OR3A1P47881 315 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 NPBWR2P48146 333 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 POU3F4P49335 361 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 FUT6P51993 359 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 P2RX3P56373 397 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms