RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 ERVK11-1P61568 191 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 CD276Q5ZPR3 534 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 TMED4Q7Z7H5 227 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 POC1AQ8NBT0 407 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 OR13C8Q8NGS7 320 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 RNASE6Q93091 150 aaKnown RBP16.8■□□□□ 0.28
SSR1-204ENST00000474597 ELMOD3Q96FG2 381 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 MED30Q96HR3 178 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 ST6GAL2Q96JF0 529 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 PPA2Q9H2U2 334 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 CA10Q9NS85 328 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 UFSP2Q9NUQ7 469 aa16.8■□□□□ 0.28
SSR1-204ENST00000474597 hCG_1807616A0A1W2PRN6 198 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 FAM221AA4D161 298 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 DEGS1O15121 323 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 CREBL2O60519 120 aaPredicted RBP16.79■□□□□ 0.28
SSR1-204ENST00000474597 ACAA1P09110 424 aaPredicted RBP16.79■□□□□ 0.28
SSR1-204ENST00000474597 ADORA2A-AS1P86434 159 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 CDK10Q15131 360 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 FBXL19-AS1Q494R0 122 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 SUMF2Q8NBJ7 301 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 CA5BP1Q8WTZ4 195 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 MRPL24Q96A35 216 aaKnown RBP16.79■□□□□ 0.28
SSR1-204ENST00000474597 MRPL37Q9BZE1 423 aaKnown RBP16.79■□□□□ 0.28
SSR1-204ENST00000474597 ZNF286AQ9HBT8 521 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 ZNF69Q9UC07 566 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 NDRG3Q9UGV2 375 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 ANXA10Q9UJ72 324 aa16.79■□□□□ 0.28
SSR1-204ENST00000474597 NKX2-6A6NCS4 301 aa16.78■□□□□ 0.28
SSR1-204ENST00000474597 HS3ST1O14792 307 aa16.78■□□□□ 0.28
SSR1-204ENST00000474597 ATXN7O15265 892 aaPredicted RBP16.78■□□□□ 0.28
SSR1-204ENST00000474597 NOS1APO75052 506 aaPredicted RBP16.78■□□□□ 0.28
SSR1-204ENST00000474597 HPXP02790 462 aa16.78■□□□□ 0.28
SSR1-204ENST00000474597 RBM39Q14498 530 aaKnown RBP16.78■□□□□ 0.28
SSR1-204ENST00000474597 ZNF826PQ6ZT77 177 aa16.78■□□□□ 0.28
SSR1-204ENST00000474597 ZDHHC22Q8N966 263 aa16.78■□□□□ 0.28
SSR1-204ENST00000474597 LILRB4Q8NHJ6 448 aa16.78■□□□□ 0.28
SSR1-204ENST00000474597 TERB2Q8NHR7 220 aa16.78■□□□□ 0.28
SSR1-204ENST00000474597 TLNRD1Q9H1K6 362 aa16.78■□□□□ 0.28
SSR1-204ENST00000474597 ESRP2Q9H6T0 727 aaKnown RBP16.78■□□□□ 0.28
SSR1-204ENST00000474597 RANGRFQ9HD47 186 aaPredicted RBP16.78■□□□□ 0.28
SSR1-204ENST00000474597 GLS2Q9UI32 602 aa16.78■□□□□ 0.28
SSR1-204ENST00000474597 ZSCAN5BA6NJL1 495 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 SNRPGP15A8MWD9 76 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 SDCBPO00560 298 aaPredicted RBP16.77■□□□□ 0.28
SSR1-204ENST00000474597 VSIG10L2P0DP72 767 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 CD200P41217 278 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 FCN2Q15485 313 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 MPPED2Q15777 294 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 C4orf46Q504U0 113 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 SLC36A1Q7Z2H8 476 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 C11orf53Q8IXP5 236 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 GTF3AQ92664 365 aaKnown RBP16.77■□□□□ 0.28
SSR1-204ENST00000474597 RDH5Q92781 318 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 IFT22Q9H7X7 185 aa16.77■□□□□ 0.28
SSR1-204ENST00000474597 VSTM5A8MXK1 200 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 C3orf80F5H4A9 247 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 SH2D1BO14796 132 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 SPRY3O43610 288 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 GLAP06280 429 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 ZNF81P51508 661 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 GRK1Q15835 563 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 SPIN3Q5JUX0 258 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 ATPAF1Q5TC12 328 aaPredicted RBP16.77■□□□□ 0.27
SSR1-204ENST00000474597 ZNF626Q68DY1 528 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 OVCH2Q7RTZ1 564 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 DPCDQ9BVM2 203 aaPredicted RBP16.77■□□□□ 0.27
SSR1-204ENST00000474597 ALX4Q9H161 411 aaPredicted RBP16.77■□□□□ 0.27
SSR1-204ENST00000474597 NECAP2Q9NVZ3 263 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 C1orf123Q9NWV4 160 aa16.77■□□□□ 0.27
SSR1-204ENST00000474597 ERRFI1Q9UJM3 462 aaPredicted RBP16.77■□□□□ 0.27
SSR1-204ENST00000474597 IGKV1D-8A0A087WSZ0 117 aa16.76■□□□□ 0.27
SSR1-204ENST00000474597 OR2AT4A6NND4 320 aa16.76■□□□□ 0.27
SSR1-204ENST00000474597 GLRA1P23415 457 aa16.76■□□□□ 0.27
SSR1-204ENST00000474597 ZNF146Q15072 292 aa16.76■□□□□ 0.27
SSR1-204ENST00000474597 ADAM5Q6NVV9 412 aa16.76■□□□□ 0.27
SSR1-204ENST00000474597 WDR82Q6UXN9 313 aa16.76■□□□□ 0.27
SSR1-204ENST00000474597 SCGB3A2Q96PL1 93 aa16.76■□□□□ 0.27
SSR1-204ENST00000474597 ZNF222Q9UK12 451 aa16.76■□□□□ 0.27
SSR1-204ENST00000474597 VSIG4Q9Y279 399 aa16.76■□□□□ 0.27
SSR1-204ENST00000474597 CHD3Q12873 2000 aaKnown RBP16.76■□□□□ 0.27
SSR1-204ENST00000474597 ATRXP46100 2492 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 PRR7Q8TB68 274 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 DMRTB1Q96MA1 342 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 FYTTD1Q96QD9 318 aaKnown RBP16.75■□□□□ 0.27
SSR1-204ENST00000474597 OR2V2Q96R30 315 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 RIMS4Q9H426 269 aaPredicted RBP16.75■□□□□ 0.27
SSR1-204ENST00000474597 HES4Q9HCC6 221 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 KCNJ16Q9NPI9 418 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 TRAV24A0A0B4J272 114 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 SIRPB1O00241 398 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 OR2H2O95918 312 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 TNFSF4P23510 183 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 SNTB1Q13884 538 aaKnown RBP16.75■□□□□ 0.27
SSR1-204ENST00000474597 ZFP69Q49AA0 526 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 PAN3Q58A45 887 aaKnown RBP16.75■□□□□ 0.27
SSR1-204ENST00000474597 Q6P435 159 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 OR52B4Q8NGK2 314 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 MARCH1Q8TCQ1 289 aa16.75■□□□□ 0.27
SSR1-204ENST00000474597 MEGF10Q96KG7 1140 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms