RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ZNF581Q9P0T4 197 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 NCOA6Q14686 2063 aaPredicted RBP16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 TMEM150CB9EJG8 249 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 SSSCA1O60232 199 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 DFFBO76075 338 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 CST7O76096 145 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 HBE1P02100 147 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 OPN1MWP04001 364 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 OPN1MW2P0DN77 364 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 OPN1MW3P0DN78 364 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 NR2C1P13056 603 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 DYNLT3P51808 116 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 C1orf61Q13536 156 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 NKAIN1Q4KMZ8 207 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 TMEM240Q5SV17 173 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 SLC22A18ASQ8N1D0 253 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 OR13H1Q8NG92 308 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 PIGTQ969N2 578 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 GNPNAT1Q96EK6 184 aaPredicted RBP16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 LYZL4Q96KX0 146 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 TP53RKQ96S44 253 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 PLEKHF2Q9H8W4 249 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 SERINC1Q9NRX5 453 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 LYRM2Q9NU23 88 aaPredicted RBP16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 GNG13Q9P2W3 67 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 C2orf72A6NCS6 295 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 C5orf67F2Z3F1 127 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 GCGP01275 180 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 FAHP16930 419 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 NKX2-1P43699 371 aaPredicted RBP16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 DCAF7P61962 342 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 THEM4Q5T1C6 240 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 DTX1Q86Y01 620 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 ODF3L1Q8IXM7 274 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 TMEM217Q8N7C4 229 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 WWTR1Q9GZV5 400 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 HIPK2Q9H2X6 1198 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 NKX2-4Q9H2Z4 354 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 B3GAT1Q9P2W7 334 aa16.18■□□□□ 0.18
ECHDC1-214ENST00000474289 JMJD7P0C870 316 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 PGA3P0DJD8 388 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 DNASE2BQ8WZ79 361 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 SYT3Q9BQG1 590 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 MAGT1Q9H0U3 335 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 SPTBN5Q9NRC6 3674 aaKnown RBP16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 ATG2AQ2TAZ0 1938 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 H3BML4 177 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 TNFRSF4P43489 277 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 CLRN1P58418 232 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 TMEM234Q8WY98 164 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 DYRK2Q92630 601 aa16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 KIAA0100Q14667 2235 aaKnown RBP16.17■□□□□ 0.18
ECHDC1-214ENST00000474289 CDS2O95674 445 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 CD55P08174 381 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 EFNA3P52797 238 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 ADGRG7Q96K78 797 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 SRD5A3Q9H8P0 318 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 SDF2L1Q9HCN8 221 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 VDAC3Q9Y277 283 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 XKRY2A2RUG3 117 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 SOX15O60248 233 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 CTSEP14091 401 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 EIF3IQ13347 325 aaKnown RBP16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 RAB35Q15286 201 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 MPV17LQ2QL34 196 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 COA6Q5JTJ3 125 aaKnown RBP16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 NOXO1Q8NFA2 376 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 MRGPRX1Q96LB2 322 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 HIST1H2AAQ96QV6 131 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 ANGPTL4Q9BY76 406 aa16.16■□□□□ 0.18
ECHDC1-214ENST00000474289 IGKV3D-11A0A0A0MRZ8 115 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 ZFP92A6NM28 416 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 OR4A8P0C604 315 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 CEACAM1P13688 526 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 P2RY6Q15077 328 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 PGAM5Q96HS1 289 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 IGFLR1Q9H665 355 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 GAB2Q9UQC2 676 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 LIPT2A6NK58 231 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 SHISA7A6NL88 538 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 SHISA8B8ZZ34 492 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 TNFP01375 233 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 TK1P04183 234 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 VEGFBP49765 207 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 SMAD4Q13485 552 aaKnown RBP16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 C21orf62-AS1Q17RA5 79 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 CXorf66Q5JRM2 361 aaPredicted RBP16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 CARD17Q5XLA6 110 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 SLC25A26Q70HW3 274 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 ZNF100Q8IYN0 542 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 GPR137CQ8N3F9 429 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 TMEM106CQ9BVX2 250 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 CBLN4Q9NTU7 201 aa16.15■□□□□ 0.18
ECHDC1-214ENST00000474289 CCDC163A0A0D9SF12 145 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 TMEM50AO95807 157 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 MMP9P14780 707 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 ZNF25P17030 456 aaPredicted RBP16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 DTYMKP23919 212 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 WDR25Q64LD2 544 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms