RNA–Protein interactions for RNA: ENST00000473863.1

TRAIP-204, Transcript of TRAF interacting protein, human

TSL 4

Gene TRAIP, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAIP-204	ENST00000473863	METAP1D	Q6UB28	335 aa	Predicted RBP	11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	PEG10	Q86TG7	708 aa	Known RBP	11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	BATF2	Q8N1L9	274 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	MUC20	Q8N307	709 aa	Predicted RBP	11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	OR10R2	Q8NGX6	335 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	SDSL	Q96GA7	329 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	TIMD4	Q96H15	378 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	SOST	Q9BQB4	213 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	ATG5	Q9H1Y0	275 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	DIABLO	Q9NR28	239 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	TREM2	Q9NZC2	230 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	HSF4	Q9ULV5	492 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	PPIAL4A	Q9Y536	164 aa		11.19	□□□□□ -0.62
TRAIP-204	ENST00000473863	IGKV1D-17	A0A075B6S4	117 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	FAM25A	B3EWG3	89 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	FAM25C	B3EWG5	89 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	FAM25G	B3EWG6	89 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	C3orf80	F5H4A9	247 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	SH2D1B	O14796	132 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	NDUFA2	O43678	99 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	OR7C1	O76099	320 aa	Predicted RBP	11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	GABRR1	P24046	479 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	MDH2	P40926	338 aa	Known RBP	11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	PITPNB	P48739	271 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	VEGFC	P49767	419 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	PDLIM4	P50479	330 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	ATP5J2	P56134	94 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	DSCR9	P59020	149 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	HOXA4	Q00056	320 aa	Predicted RBP	11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	PAX5	Q02548	391 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	IKZF1	Q13422	519 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	ZMYND11	Q15326	602 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	TAF9	Q16594	264 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	DEFB113	Q30KQ7	82 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	MOGAT2	Q3SYC2	334 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	TMEM69	Q5SWH9	247 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	SHE	Q5VZ18	495 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	DNM1P46	Q6ZS02	220 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	OR4M1	Q8NGD0	313 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	PHF21A	Q96BD5	680 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	LURAP1	Q96LR2	239 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	AKIP1	Q9NQ31	210 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	EXTL2	Q9UBQ6	330 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863		V9GYH0	126 aa		11.18	□□□□□ -0.62
TRAIP-204	ENST00000473863	NKX6-3	A6NJ46	265 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	RFPL4A	A6NLU0	287 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	RFPL4AL1	F8VTS6	287 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	LYNX1	G3V0Z9	82 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	MFNG	O00587	321 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	TNFRSF13B	O14836	293 aa	Predicted RBP	11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	SOCS1	O15524	211 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	CA11	O75493	328 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	OR2H2	O95918	312 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	CSN2	P05814	226 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	GSTP1	P09211	210 aa	Known RBP	11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	LYNX1	P0DP58	116 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	HIST1H1D	P16402	221 aa	Known RBP	11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	FUT3	P21217	361 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	BLVRB	P30043	206 aa	Predicted RBP	11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	KCNJ3	P48549	501 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	TMEM50B	P56557	158 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	LSAMP	Q13449	338 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	SPANXN2	Q5MJ10	180 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	FAM201A	Q5SY85	155 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	ZNF788	Q6ZQV5	615 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	DCDC5	Q6ZRR9	648 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	ZNF525	Q8N782	197 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	C15orf40	Q8WUR7	153 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	S100Z	Q8WXG8	99 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	ST8SIA4	Q92187	359 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	RAB1C	Q92928	201 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	RAB3C	Q96E17	227 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	SEH1L	Q96EE3	360 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	DIRAS2	Q96HU8	199 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	KAAG1	Q9UBP8	84 aa		11.17	□□□□□ -0.62
TRAIP-204	ENST00000473863	IGHV3OR15-7	A0A075B7D8	119 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	TRAV24	A0A0B4J272	114 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	SERPINE3	A8MV23	424 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	SLC33A1	O00400	549 aa	Predicted RBP	11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	SIGLEC5	O15389	551 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	ZNF737	O75373	536 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	MELTF	P08582	738 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	PRDX2	P32119	198 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	GPR6	P46095	362 aa	Predicted RBP	11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	SNU13	P55769	128 aa	Known RBP	11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	TAS2R20	P59543	309 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	GMFB	P60983	142 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	ZNF260	Q3ZCT1	412 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	PLAC9	Q5JTB6	97 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	PYHIN1	Q6K0P9	492 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	CLEC2A	Q6UVW9	174 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	MFSD4A	Q8N468	514 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	ZNF561	Q8N587	486 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	SPIC	Q8N5J4	248 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	CD177	Q8N6Q3	437 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	BOLL	Q8N9W6	283 aa	Known RBP	11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	PERP	Q96FX8	193 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	ARHGAP5-AS1	Q96IT6	56 aa		11.16	□□□□□ -0.62
TRAIP-204	ENST00000473863	GAFA1	Q96PS6	74 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms