RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 OR5B12Q96R08 314 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 PARP12Q9H0J9 701 aaKnown RBP4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 OR52D1Q9H346 318 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 PLEKHJ1Q9NW61 149 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 HSF4Q9ULV5 492 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 COL4A4P53420 1690 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 CCDC88CQ9P219 2028 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 OR6C6A6NF89 314 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 ARL5CA6NH57 179 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 M0R3H8 397 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 HCRTR1O43613 425 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC2A10O95528 541 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 CD99P14209 185 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 DRD1P21728 446 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 TIA1P31483 386 aaKnown RBP eCLIP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 SOAT1P35610 550 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 APOBEC1P41238 236 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 HINT1P49773 126 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 MPV17LQ2QL34 196 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 SPATA45Q537H7 98 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 TP53I3Q53FA7 332 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF880Q6PDB4 577 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 Q6ZWC4 215 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 GDF7Q7Z4P5 450 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 CENPVQ7Z7K6 275 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 TMEM173Q86WV6 379 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF584Q8IVC4 421 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 PIANPQ8IYJ0 282 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 CMTM8Q8IZV2 173 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 METTL27Q8N6F8 245 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 OR52R1Q8NGF1 315 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 TMEM37Q8WXS4 190 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 DDIT4LQ96D03 193 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 LMLNQ96KR4 655 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 PRAP1Q96NZ9 151 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 LRRC3BQ96PB8 259 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 MOB1AQ9H8S9 216 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 MRPL22Q9NWU5 206 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 PLA2G3Q9NZ20 509 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 LOC102724200A0A096LPH7 203 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 MEIS3P1A6NDR6 274 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 H7BYZ3 331 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 SFT2D2O95562 160 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 TSPAN13O95857 204 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 AZU1P20160 251 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 GPR6P46095 362 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 RAE1P78406 368 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 LCN2P80188 198 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF154Q13106 437 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 C2orf76Q3KRA6 126 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 Q499Y3 187 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 GPR157Q5UAW9 335 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 DPPA3Q6W0C5 159 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 RD3Q7Z3Z2 195 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 LRP11Q86VZ4 500 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 ST6GALNAC3Q8NDV1 305 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 OR4K1Q8NGD4 311 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 OR1N2Q8NGR9 330 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 VN1R17PQ8TDU5 208 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 FGGYQ96C11 551 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 ALG14Q96F25 216 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 TMEM39BQ9GZU3 492 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF703Q9H7S9 590 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 SDF2L1Q9HCN8 221 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 PXMP2Q9NR77 195 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 TMED7Q9Y3B3 224 aa4.46□□□□□ -1.7
TMEM39A-206ENST00000473684 FAM230AA0A1W2PPH8 454 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 E5RGE8 158 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 B4GALT2O60909 372 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 HRASP01112 189 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 HNRNPA1P09651 372 aaKnown RBP eCLIP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF708P17019 499 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 MDKP21741 143 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 GCSHP23434 173 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 S100GP29377 79 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC6A12P48065 614 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 TAS2R41P59536 307 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 TAS2R30P59541 319 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 CSNK2A1P68400 391 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 JAG1P78504 1218 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 EIF2B1Q14232 305 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 IHHQ14623 411 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 EXT1Q16394 746 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 TMEM249Q2WGJ8 235 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 RAET1LQ5VY80 246 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 SP5Q6BEB4 398 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 FCRL6Q6DN72 434 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 SPSB3Q6PJ21 355 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 WDR82Q6UXN9 313 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 TMEM182Q6ZP80 229 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 SGPP2Q8IWX5 399 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 UBALD2Q8IYN6 164 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 CFAP52Q8N1V2 620 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 UMODL1-AS1Q8N2C9 162 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 TMEM217Q8N7C4 229 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 CSNK2A3Q8NEV1 391 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 OR51G1Q8NGK1 321 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 OR2Y1Q8NGV0 311 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 OR5AK3PQ8NH89 298 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 CACNG8Q8WXS5 425 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 223.9 ms