RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 SERPINA2P20848 420 aa8.82□□□□□ -1
APTX-216ENST00000472896 PPP1CCP36873 323 aaKnown RBP8.82□□□□□ -1
APTX-216ENST00000472896 APOBEC1P41238 236 aaKnown RBP8.82□□□□□ -1
APTX-216ENST00000472896 HLA-DRB3P79483 266 aa8.82□□□□□ -1
APTX-216ENST00000472896 IL13RA2Q14627 380 aa8.82□□□□□ -1
APTX-216ENST00000472896 HYAL4Q2M3T9 481 aa8.82□□□□□ -1
APTX-216ENST00000472896 PRICKLE4Q2TBC4 344 aa8.82□□□□□ -1
APTX-216ENST00000472896 C16orf54Q6UWD8 224 aa8.82□□□□□ -1
APTX-216ENST00000472896 RBMXL3Q8N7X1 1067 aaKnown RBP8.82□□□□□ -1
APTX-216ENST00000472896 OR5L2Q8NGL0 311 aa8.82□□□□□ -1
APTX-216ENST00000472896 FAM213BQ8TBF2 198 aa8.82□□□□□ -1
APTX-216ENST00000472896 TAAR8Q969N4 342 aa8.82□□□□□ -1
APTX-216ENST00000472896 RBMXL1Q96E39 390 aaKnown RBP8.82□□□□□ -1
APTX-216ENST00000472896 BSCL2Q96G97 398 aaPredicted RBP8.82□□□□□ -1
APTX-216ENST00000472896 SMIM10Q96HG1 83 aa8.82□□□□□ -1
APTX-216ENST00000472896 OR6C1Q96RD1 312 aa8.82□□□□□ -1
APTX-216ENST00000472896 ATG101Q9BSB4 218 aa8.82□□□□□ -1
APTX-216ENST00000472896 ANGPTL4Q9BY76 406 aa8.82□□□□□ -1
APTX-216ENST00000472896 SMIM3Q9BZL3 60 aa8.82□□□□□ -1
APTX-216ENST00000472896 PARP12Q9H0J9 701 aaKnown RBP8.82□□□□□ -1
APTX-216ENST00000472896 CNTD2Q9H8S5 307 aa8.82□□□□□ -1
APTX-216ENST00000472896 ZNF346Q9UL40 294 aaKnown RBP8.82□□□□□ -1
APTX-216ENST00000472896 PADI1Q9ULC6 663 aa8.82□□□□□ -1
APTX-216ENST00000472896 DAPP1Q9UN19 280 aa8.82□□□□□ -1
APTX-216ENST00000472896 SLC5A6Q9Y289 635 aa8.82□□□□□ -1
APTX-216ENST00000472896 MRPS18CQ9Y3D5 142 aaKnown RBP8.82□□□□□ -1
APTX-216ENST00000472896 SPACA6W5XKT8 324 aa8.82□□□□□ -1
APTX-216ENST00000472896 IGKV1D-42A0A075B6H8 117 aa8.81□□□□□ -1
APTX-216ENST00000472896 A6NCN8 305 aa8.81□□□□□ -1
APTX-216ENST00000472896 TMEM210A6NLX4 147 aa8.81□□□□□ -1
APTX-216ENST00000472896 A8MVM7 634 aa8.81□□□□□ -1
APTX-216ENST00000472896 TP53I11O14683 189 aa8.81□□□□□ -1
APTX-216ENST00000472896 OR6A2O95222 327 aa8.81□□□□□ -1
APTX-216ENST00000472896 IL18BPO95998 194 aa8.81□□□□□ -1
APTX-216ENST00000472896 GNB3P16520 340 aa8.81□□□□□ -1
APTX-216ENST00000472896 OR3A2P47893 321 aa8.81□□□□□ -1
APTX-216ENST00000472896 GABRA4P48169 554 aa8.81□□□□□ -1
APTX-216ENST00000472896 UNC119Q13432 240 aa8.81□□□□□ -1
APTX-216ENST00000472896 ZAR1Q86SH2 424 aa8.81□□□□□ -1
APTX-216ENST00000472896 ZNF573Q86YE8 665 aa8.81□□□□□ -1
APTX-216ENST00000472896 OIT3Q8WWZ8 545 aa8.81□□□□□ -1
APTX-216ENST00000472896 ERGIC1Q969X5 290 aa8.81□□□□□ -1
APTX-216ENST00000472896 RELTQ969Z4 430 aa8.81□□□□□ -1
APTX-216ENST00000472896 SLC22A18Q96BI1 424 aa8.81□□□□□ -1
APTX-216ENST00000472896 TSPAN32Q96QS1 320 aa8.81□□□□□ -1
APTX-216ENST00000472896 AMELYQ99218 206 aa8.81□□□□□ -1
APTX-216ENST00000472896 SRD5A3Q9H8P0 318 aa8.81□□□□□ -1
APTX-216ENST00000472896 MYOTQ9UBF9 498 aa8.81□□□□□ -1
APTX-216ENST00000472896 LSM5Q9Y4Y9 91 aaKnown RBP8.81□□□□□ -1
APTX-216ENST00000472896 OTOGQ6ZRI0 2925 aa8.81□□□□□ -1
APTX-216ENST00000472896 ZNF705GA8MUZ8 300 aaPredicted RBP8.81□□□□□ -1
APTX-216ENST00000472896 SRSF10O75494 262 aaKnown RBP8.81□□□□□ -1
APTX-216ENST00000472896 SCAF4O95104 1147 aaKnown RBP8.81□□□□□ -1
APTX-216ENST00000472896 GPR75O95800 540 aa8.81□□□□□ -1
APTX-216ENST00000472896 CYB5R3P00387 301 aaPredicted RBP8.81□□□□□ -1
APTX-216ENST00000472896 PGA4P0DJD7 388 aa8.81□□□□□ -1
APTX-216ENST00000472896 PGA5P0DJD9 388 aa8.81□□□□□ -1
APTX-216ENST00000472896 VSIG8P0DPA2 414 aa8.81□□□□□ -1
APTX-216ENST00000472896 FGF5P12034 268 aa8.81□□□□□ -1
APTX-216ENST00000472896 PDLIM4P50479 330 aa8.81□□□□□ -1
APTX-216ENST00000472896 RND3P61587 244 aa8.81□□□□□ -1
APTX-216ENST00000472896 MGAT2Q10469 447 aa8.81□□□□□ -1
APTX-216ENST00000472896 RUNX2Q13950 521 aa8.81□□□□□ -1
APTX-216ENST00000472896 TAF9Q16594 264 aa8.81□□□□□ -1
APTX-216ENST00000472896 GXYLT1Q4G148 440 aa8.81□□□□□ -1
APTX-216ENST00000472896 C1orf194Q5T5A4 169 aa8.81□□□□□ -1
APTX-216ENST00000472896 AADACL3Q5VUY0 350 aa8.81□□□□□ -1
APTX-216ENST00000472896 WBP2NLQ6ICG8 309 aa8.81□□□□□ -1
APTX-216ENST00000472896 BTNL3Q6UXE8 466 aa8.81□□□□□ -1
APTX-216ENST00000472896 DPPA3Q6W0C5 159 aa8.81□□□□□ -1
APTX-216ENST00000472896 PLXDC1Q8IUK5 500 aa8.81□□□□□ -1
APTX-216ENST00000472896 FOXRED2Q8IWF2 684 aa8.81□□□□□ -1
APTX-216ENST00000472896 OR4N5Q8IXE1 308 aa8.81□□□□□ -1
APTX-216ENST00000472896 C10orf53Q8N6V4 93 aa8.81□□□□□ -1
APTX-216ENST00000472896 TMEM104Q8NE00 496 aa8.81□□□□□ -1
APTX-216ENST00000472896 NOXO1Q8NFA2 376 aa8.81□□□□□ -1
APTX-216ENST00000472896 OR13G1Q8NGZ3 307 aa8.81□□□□□ -1
APTX-216ENST00000472896 DTD1Q8TEA8 209 aa8.81□□□□□ -1
APTX-216ENST00000472896 TMEM18Q96B42 140 aa8.81□□□□□ -1
APTX-216ENST00000472896 C8orf44Q96CB5 159 aa8.81□□□□□ -1
APTX-216ENST00000472896 CTHRC1Q96CG8 243 aa8.81□□□□□ -1
APTX-216ENST00000472896 CMBLQ96DG6 245 aa8.81□□□□□ -1
APTX-216ENST00000472896 SNRNP40Q96DI7 357 aaKnown RBP8.81□□□□□ -1
APTX-216ENST00000472896 JSRP1Q96MG2 331 aaPredicted RBP8.81□□□□□ -1
APTX-216ENST00000472896 ZNF385AQ96PM9 386 aaKnown RBP8.81□□□□□ -1
APTX-216ENST00000472896 RARRES2Q99969 163 aa8.81□□□□□ -1
APTX-216ENST00000472896 G6PC3Q9BUM1 346 aa8.81□□□□□ -1
APTX-216ENST00000472896 WFDC1Q9HC57 220 aa8.81□□□□□ -1
APTX-216ENST00000472896 KIR2DL5BA0A0G2JN68 375 aa8.8□□□□□ -1
APTX-216ENST00000472896 KIR2DL5BA0A0G2JPC4 375 aa8.8□□□□□ -1
APTX-216ENST00000472896 LOC107986453A0A1B0GWG9 222 aa8.8□□□□□ -1
APTX-216ENST00000472896 FAM230AA0A1W2PPH8 454 aa8.8□□□□□ -1
APTX-216ENST00000472896 ZNF860A6NHJ4 632 aa8.8□□□□□ -1
APTX-216ENST00000472896 A6NIZ1 184 aa8.8□□□□□ -1
APTX-216ENST00000472896 CEACAM4O75871 244 aa8.8□□□□□ -1
APTX-216ENST00000472896 CSTAP01040 98 aa8.8□□□□□ -1
APTX-216ENST00000472896 CTSDP07339 412 aaPredicted RBP8.8□□□□□ -1
APTX-216ENST00000472896 SLC35G6P0C7Q6 338 aa8.8□□□□□ -1
APTX-216ENST00000472896 HIST1H1DP16402 221 aaKnown RBP8.8□□□□□ -1
APTX-216ENST00000472896 AMY2BP19961 511 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms