RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 IL36GQ9NZH8 169 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 NUPL2O15504 423 aaKnown RBP12.89□□□□□ -0.35
UBXN11-213ENST00000472155 ZNF728P0DKX0 622 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 FUT3P21217 361 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 AADACP22760 399 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 DTYMKP23919 212 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 ERVS71-1P61550 626 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 CLN3Q13286 438 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 OR2T2Q6IF00 324 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 MDP1Q86V88 176 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 LHFPL5Q8TAF8 219 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 EXTL1Q92935 676 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 BSCL2Q96G97 398 aaPredicted RBP12.89□□□□□ -0.35
UBXN11-213ENST00000472155 TRGV5A0A0B4J1U4 118 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 CD300LBA8K4G0 201 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 SS18L1O75177 396 aaPredicted RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 SCGB1D2O95969 90 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 HOXD4P09016 255 aaPredicted RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 SCTP09683 121 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 CD46P15529 392 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 SURF2Q15527 256 aaPredicted RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 PAN3Q58A45 887 aaKnown RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 HAGHLQ6PII5 290 aaPredicted RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 SGPP2Q8IWX5 399 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 OR5T2Q8NGG2 359 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 RTN4IP1Q8WWV3 396 aaPredicted RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 APOBEC3DQ96AK3 386 aaPredicted RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 EDARQ9UNE0 448 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 RHBDL1O75783 438 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 SELEP16581 610 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 SRSF3P84103 164 aaKnown RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 CYCSP99999 105 aaKnown RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 BTN1A1Q13410 526 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 C20orf204Q6ZNR8 217 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 ZDHHC23Q8IYP9 409 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 FDCSPQ8NFU4 85 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 WNT2BQ93097 391 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 CPNE2Q96FN4 548 aaPredicted RBP12.88□□□□□ -0.35
UBXN11-213ENST00000472155 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 ASF1BQ9NVP2 202 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 PCDHB10Q9UN67 800 aa12.88□□□□□ -0.35
UBXN11-213ENST00000472155 SLC22A20A6NK97 555 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 DIRAS3O95661 229 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 TMEM187Q14656 261 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 ALKBH6Q3KRA9 238 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 RTL6Q6ICC9 239 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 ZNF585AQ6P3V2 769 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 OR1K1Q8NGR3 316 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 C1orf123Q9NWV4 160 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 NUP50Q9UKX7 468 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 LSM5Q9Y4Y9 91 aaKnown RBP12.87□□□□□ -0.35
UBXN11-213ENST00000472155 BET1O15155 118 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 CA6P23280 308 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 SOX8P57073 446 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 HERPUD1Q15011 391 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 RNPS1Q15287 305 aaKnown RBP12.87□□□□□ -0.35
UBXN11-213ENST00000472155 CEACAM21Q3KPI0 293 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 PXDC1Q5TGL8 231 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 RPL7L1Q6DKI1 246 aaKnown RBP12.87□□□□□ -0.35
UBXN11-213ENST00000472155 HSD17B13Q7Z5P4 300 aaPredicted RBP12.87□□□□□ -0.35
UBXN11-213ENST00000472155 BCL2L2Q92843 193 aaPredicted RBP12.87□□□□□ -0.35
UBXN11-213ENST00000472155 SMIM3Q9BZL3 60 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 TAS2R3Q9NYW6 316 aa12.87□□□□□ -0.35
UBXN11-213ENST00000472155 INTS1Q8N201 2190 aaKnown RBP12.86□□□□□ -0.35
UBXN11-213ENST00000472155 TRAV39A0A0B4J263 110 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 FTH1P19P0C7X4 201 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 LYL1P12980 280 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 TNFSF10P50591 281 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 BPIFCQ8NFQ6 507 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 GLYATL2Q8WU03 294 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 TP53RKQ96S44 253 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 SLC5A7Q9GZV3 580 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 ZNF286AQ9HBT8 521 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 PLA2G2EQ9NZK7 142 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 DIDO1Q9BTC0 2240 aaKnown RBP12.86□□□□□ -0.35
UBXN11-213ENST00000472155 LYZL6O75951 148 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 HKR1P10072 659 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 ABCA11PQ4W5N1 156 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 BAP18Q8IXM2 172 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 OR52M1Q8NGK5 317 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 SHARPINQ9H0F6 387 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 NAA60Q9H7X0 242 aa12.86□□□□□ -0.35
UBXN11-213ENST00000472155 CADP27708 2225 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 IGKV1-6A0A0C4DH72 117 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 HS3ST1O14792 307 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 ACTL6AO96019 429 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 APOC3P02656 99 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 PRKACAP17612 351 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 FBXW9Q5XUX1 488 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 PIP4P1Q86T03 277 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 CNTNAP3BQ96NU0 1288 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 CNTNAP3Q9BZ76 1288 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 ZDHHC11Q9H8X9 412 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
UBXN11-213ENST00000472155 ATPIF1Q9UII2 106 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 PRELID1Q9Y255 219 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 SPEF1Q9Y4P9 236 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 ANKRD11Q6UB99 2663 aaPredicted RBP12.85□□□□□ -0.35
UBXN11-213ENST00000472155 PIEZO2Q9H5I5 2752 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms