RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HAND1O96004 215 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 IFNA1P01562 189 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 BPGMP07738 259 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 GIPP09681 153 aaPredicted RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 TACSTD2P09758 323 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 TSPAN19P0C672 248 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 IFI30P13284 250 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 GABRA1P14867 456 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 UGT2B7P16662 529 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 GPX2P18283 190 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 GZMHP20718 246 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 ATP5A1P25705 553 aaKnown RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 FOXN2P32314 431 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 RPL35P42766 123 aaKnown RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 LIM2P55344 173 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 KLF3P57682 345 aaPredicted RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 TCTAP57738 103 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 NTHL1P78549 312 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 IFITM2Q01629 132 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 PRKCDQ05655 676 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 SLC10A7Q0GE19 358 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 EDDM3AQ14507 147 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 ATXN7L3Q14CW9 347 aaPredicted RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 OR1Q1Q15612 314 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 TRAM1Q15629 374 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 GABRA6Q16445 453 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 TAL2Q16559 108 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 PRSS8Q16651 343 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 TBC1D28Q2M2D7 210 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 TTLL9Q3SXZ7 439 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 LIN52Q52LA3 116 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 TMEM97Q5BJF2 176 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 FAM120AOSQ5T036 256 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 WDR74Q6RFH5 385 aaPredicted RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 Q6ZSR3 168 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 ASCL5Q7RTU5 278 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 C10orf107Q8IVU9 208 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 CTAGE3PQ8IX95 158 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 LRRC25Q8N386 305 aaPredicted RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 EIF4E3Q8N5X7 224 aaKnown RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 SLC26A10Q8NG04 563 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 OR4M2Q8NGB6 313 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 OR9Q1Q8NGQ5 310 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 OR1P1Q8NH06 330 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 ITFG1Q8TB96 612 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 SFXN5Q8TD22 340 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 SDR42E1Q8WUS8 393 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 TNFAIP8L1Q8WVP5 186 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 IL1F10Q8WWZ1 152 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 OR8D1Q8WZ84 308 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 UBE2E3Q969T4 207 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 UPRTQ96BW1 309 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 CCDC126Q96EE4 140 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 CPNE2Q96FN4 548 aaPredicted RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 SDSLQ96GA7 329 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 RNF185Q96GF1 192 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 PYURFQ96I23 114 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 TMEM208Q9BTX3 173 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 CDCA4Q9BXL8 241 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 CHIAQ9BZP6 476 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 ACTR6Q9GZN1 396 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 NXF2Q9GZY0 626 aaKnown RBP2.37□□□□□ -2.03
CD46-213ENST00000471987 DSN1Q9H410 356 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 RDH14Q9HBH5 336 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 WFDC1Q9HC57 220 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 NIT2Q9NQR4 276 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 IL36GQ9NZH8 169 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 SLC35A3Q9Y2D2 325 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 SNX24Q9Y343 169 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 LTBP4Q8N2S1 1624 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 MYO5BQ9ULV0 1848 aa2.37□□□□□ -2.03
CD46-213ENST00000471987 MYH10P35580 1976 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 PCM1Q15154 2024 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 IGHV3-64DA0A0J9YX35 117 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 ZNF816-ZNF321PA0A0X1KG74 233 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 IGSF23A1L1A6 192 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 CLDN24A6NM45 220 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 TP53I11O14683 189 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 CYB5BO43169 146 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 SYNGR1O43759 233 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 PDE6DO43924 150 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 MPZL2O60487 215 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 GGCTO75223 188 aaKnown RBP2.36□□□□□ -2.03
CD46-213ENST00000471987 ALOX12BO75342 701 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 TRAPPC6AO75865 159 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 C1QCP02747 245 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 RLN2P04090 185 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 TYMSP04818 313 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 SERPINA7P05543 415 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 ACSM4P0C7M7 580 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 ZNF806P0C7X5 589 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 LIMS3P0CW19 117 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 LIMS4P0CW20 117 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 ZNF25P17030 456 aaPredicted RBP2.36□□□□□ -2.03
CD46-213ENST00000471987 IGFBP3P17936 291 aaPredicted RBP2.36□□□□□ -2.03
CD46-213ENST00000471987 PVALBP20472 110 aaPredicted RBP2.36□□□□□ -2.03
CD46-213ENST00000471987 HIST1H1TP22492 207 aaPredicted RBP2.36□□□□□ -2.03
CD46-213ENST00000471987 OMGP23515 440 aa2.36□□□□□ -2.03
CD46-213ENST00000471987 RPS12P25398 132 aaKnown RBP2.36□□□□□ -2.03
CD46-213ENST00000471987 HMGB2P26583 209 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms