RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ZC4H2Q9NQZ6 224 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 TMCC3Q9ULS5 477 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 LINC00588Q9Y4M8 146 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 SDK1Q7Z5N4 2213 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 A0A0J9YX75 114 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 OR5H14A6NHG9 310 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 GYG2O15488 501 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 RNF113AO15541 343 aaKnown RBP0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 GPR75O95800 540 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 AGTP01019 485 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 GCGP01275 180 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 HTR2BP41595 481 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 CLDN6P56747 220 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 YWHAEP62258 255 aaKnown RBP0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 GPR176Q14439 515 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 TPRXLQ17RH7 258 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 UBE2NLQ5JXB2 153 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 THOC7Q6I9Y2 204 aaKnown RBP0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 BZW1Q7L1Q6 419 aaKnown RBP0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 RBM45Q8IUH3 476 aaKnown RBP0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 INO80EQ8NBZ0 244 aaPredicted RBP0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 OR11G2Q8NGC1 345 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 C10orf105Q8TEF2 133 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 ISOC2Q96AB3 205 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 DDIT4LQ96D03 193 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 PLIN2Q99541 437 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 ULBP1Q9BZM6 244 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 TBC1D24Q9ULP9 559 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 TFR2Q9UP52 801 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 TRPM6Q9BX84 2022 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
PRPF40A-207ENST00000471701 MICAL3Q7RTP6 2002 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 SLC37A4O43826 429 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 ERLIN1O75477 346 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 CPMP14384 443 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 ZNF7P17097 686 aaPredicted RBP0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 HCCSP53701 268 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 DNAJC3Q13217 504 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 BEX5Q5H9J7 111 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 C16orf87Q6PH81 154 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 CCDC148Q8NFR7 591 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 TSEN15Q8WW01 171 aaKnown RBP0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 C22orf15Q8WYQ4 148 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 OR8D1Q8WZ84 308 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 QKIQ96PU8 341 aaKnown RBP eCLIP0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 TSGA10Q9BZW7 698 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 ARL6Q9H0F7 186 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 TDRD3Q9H7E2 651 aaKnown RBP0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 PLEKHA1Q9HB21 404 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 MRPS30Q9NP92 439 aaKnown RBP0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 PSORS1C2Q9UIG4 136 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 ADAMTSL3P82987 1691 aa0.37□□□□□ -2.35
PRPF40A-207ENST00000471701 A0A075B6Q4 140 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 TRGV2A0A075B6R0 118 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 MUC21A0A0G2JKD1 596 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 MUC21A0A140T8X8 626 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 FAM240AA0A1B0GVK7 77 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 LRRIQ4A6NIV6 560 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 OR2AT4A6NND4 320 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 F8VP50 259 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 PLPP3O14495 311 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 EEF1E1O43324 174 aaKnown RBP0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 RLN2P04090 185 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 PSKH1P11801 424 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 CD9P21926 228 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 MLF1P58340 268 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 TPRG1LQ5T0D9 272 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 LGALS9CQ6DKI2 356 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 LAIR2Q6ISS4 152 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 SLC25A45Q8N413 288 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 ZFAND1Q8TCF1 268 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 HIST1H2BAQ96A08 127 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 ADTRPQ96IZ2 230 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 CAPZA3Q96KX2 299 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 DDIT4Q9NX09 232 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 RPUSD1Q9UJJ7 312 aaKnown RBP0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 PHLDA3Q9Y5J5 127 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 PTPRKQ15262 1439 aa0.36□□□□□ -2.35
PRPF40A-207ENST00000471701 SBNO1A3KN83 1393 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 KMT2DO14686 5537 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 LOC102725191A0A1B0GVB3 256 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 ZNF99A8MXY4 864 aaPredicted RBP0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 PLEKHA8P1O95397 391 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 M6PRP20645 277 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 CD82P27701 267 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 EVI2BP34910 448 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 MAGEA1P43355 309 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 RPS5P46782 204 aaKnown RBP0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 APOFQ13790 326 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 RCN1Q15293 331 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 Q499Y3 187 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 ATP6AP1LQ52LC2 224 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 FAM27D1Q5T7N8 215 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 GLYATQ6IB77 296 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 ERICH5Q6P6B1 374 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 SETD3Q86TU7 594 aaPredicted RBP0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 OFCC1Q8IZS5 231 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 C10orf126Q8N4M7 172 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 OR52K1Q8NGK4 314 aa0.35□□□□□ -2.35
PRPF40A-207ENST00000471701 OR4A5Q8NH83 315 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms