RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 C17orf107Q6ZR85 190 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 JAGN1Q8N5M9 183 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 CHST4Q8NCG5 386 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 OR51T1Q8NGJ9 327 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 FCGR1BQ92637 280 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 TMEM203Q969S6 136 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 ONECUT1Q9UBC0 465 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 ING4Q9UNL4 249 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 SVEP1Q4LDE5 3571 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 CDRT1O95170 752 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 OR2H2O95918 312 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 IGHV4-38-2P0DP08 117 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 SRMP19623 302 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 GABRR1P24046 479 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 SNU13P55769 128 aaKnown RBP12.58□□□□□ -0.4
SDC3-203ENST00000471567 RPS25P62851 125 aaKnown RBP12.58□□□□□ -0.4
SDC3-203ENST00000471567 IL13RA2Q14627 380 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 TUSC1Q2TAM9 212 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 KCTD21Q4G0X4 260 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 GPR157Q5UAW9 335 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 TMEM200BQ69YZ2 307 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 Q6P435 159 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 ZNF773Q6PK81 442 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 TMEM91Q6ZNR0 172 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 C9orf139Q6ZV77 190 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 USP43Q70EL4 1123 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 GDPD3Q7L5L3 318 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 LYPD6Q86Y78 171 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 FAM185AQ8N0U4 392 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 BPIFB2Q8N4F0 458 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 ZNF418Q8TF45 676 aaPredicted RBP12.58□□□□□ -0.4
SDC3-203ENST00000471567 FOXRED1Q96CU9 486 aaPredicted RBP12.58□□□□□ -0.4
SDC3-203ENST00000471567 UQCC2Q9BRT2 126 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 SLITRK2Q9H156 845 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 OCEL1Q9H607 264 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 C19orf12Q9NSK7 152 aa12.58□□□□□ -0.4
SDC3-203ENST00000471567 TRAV40A0A0B4J280 105 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 MGST3O14880 152 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 DEGS1O15121 323 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 TCF21O43680 179 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 PSPNO60542 156 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 ARL6IP5O75915 188 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 RGS9O75916 674 aaPredicted RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 HTR3BO95264 441 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 CSTBP04080 98 aaKnown RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 ZNF44P15621 663 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 ERP29P30040 261 aaKnown RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 MEF2CQ06413 473 aaPredicted RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 GRK1Q15835 563 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 SSX1Q16384 188 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 NHLRC3Q5JS37 347 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 FAM27D1Q5T7N8 215 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 METAP1DQ6UB28 335 aaPredicted RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 VMO1Q7Z5L0 202 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 LRRTM1Q86UE6 522 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 Q8N7P7 452 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 OR10K1Q8NGX5 313 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 MUL1Q969V5 352 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 NKX3-1Q99801 234 aaPredicted RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 SUCNR1Q9BXA5 334 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 MS4A7Q9GZW8 240 aaPredicted RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 METTL8Q9H825 291 aaKnown RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 UNKLQ9H9P5 680 aaKnown RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 ZNF69Q9UC07 566 aa12.57□□□□□ -0.4
SDC3-203ENST00000471567 MRPS28Q9Y2Q9 187 aaKnown RBP12.57□□□□□ -0.4
SDC3-203ENST00000471567 A0A0G2JK05 382 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 CENPVL3A0A0U1RRI6 287 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 FUOMA2VDF0 154 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 SIRPB1O00241 398 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 CD37P11049 281 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 GTF2F2P13984 249 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 PRTN3P24158 256 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 OR3A1P47881 315 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 EDDM3BP56851 147 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 FABP5Q01469 135 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 SCN1BQ07699 218 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 GLT8D1Q68CQ7 371 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 GLIPR1L1Q6UWM5 242 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 LINC00596Q86U02 117 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 OSR2Q8N2R0 312 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 OR4S1Q8NGB4 309 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 OR4M1Q8NGD0 313 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 MRPS24Q96EL2 167 aaKnown RBP12.56□□□□□ -0.4
SDC3-203ENST00000471567 NR1H4Q96RI1 486 aaPredicted RBP12.56□□□□□ -0.4
SDC3-203ENST00000471567 PPIL3Q9H2H8 161 aaKnown RBP12.56□□□□□ -0.4
SDC3-203ENST00000471567 NDUFB11Q9NX14 153 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
SDC3-203ENST00000471567 IGHV3OR16-10A0A075B7F0 116 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 hCG_1809904A0A1W2PP81 198 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 A0A1W2PPE2 198 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 A0A1W2PR64 198 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 A0A1W2PRV1 198 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 hADV38S2A0JD32 116 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 SLC33A1O00400 549 aaPredicted RBP12.55□□□□□ -0.4
SDC3-203ENST00000471567 CCRL2O00421 344 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 CSN2P05814 226 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 GALP22466 123 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 RBM11P57052 281 aaKnown RBP12.55□□□□□ -0.4
SDC3-203ENST00000471567 GUCA2AQ02747 115 aa12.55□□□□□ -0.4
SDC3-203ENST00000471567 SLC22A6Q4U2R8 563 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms