RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 CDK2P24941 298 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 PRDX2P32119 198 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 TMEM33P57088 247 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 BTG1P62324 171 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 IFITM3Q01628 133 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 CR1LQ2VPA4 569 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 AVPI1Q5T686 147 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 ZNF880Q6PDB4 577 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM216BQ8N7L0 139 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 SAMD12Q8N8I0 201 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 MCFD2Q8NI22 146 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 KCNG3Q8TAE7 436 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 PERPQ96FX8 193 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 ARHGAP5-AS1Q96IT6 56 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 GPER1Q99527 375 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 NUDT16L1Q9BRJ7 211 aaKnown RBP8.21□□□□□ -1.1
SF3A1-207ENST00000471342 SELENOIQ9C0D9 397 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 BPESC1Q9GZL8 116 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 EGLN1Q9GZT9 426 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 MED13LQ71F56 2210 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 PPIAL4EA0A075B759 164 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 MEIOCA2RUB1 952 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 CEACAM18A8MTB9 384 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 PPIAL4DF5H284 164 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 TRAPPC2LH3BP13 241 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 K7N7A8 449 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 IFNL4K9M1U5 179 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 XRCC3O43542 346 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 LANCL1O43813 399 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 ZNF780AO75290 641 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-207ENST00000471342 CRTAPO75718 401 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-207ENST00000471342 HAND1O96004 215 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 NAPSAO96009 420 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 PPIAL4FP0DN26 164 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 MUC1P15941 1255 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-207ENST00000471342 PRKACAP17612 351 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 ZFP36P26651 326 aaKnown RBP8.2□□□□□ -1.1
SF3A1-207ENST00000471342 NR4A2P43354 598 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 VEGFCP49767 419 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 ART1P52961 327 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 GMFBP60983 142 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 COL10A1Q03692 680 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 KRTAP1-1Q07627 177 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 MZT1Q08AG7 82 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 TMEM155Q4W5P6 130 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 SPIN3Q5JUX0 258 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 UBE2NLQ5JXB2 153 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 RSBN1Q5VWQ0 802 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-207ENST00000471342 SHEQ5VZ18 495 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 CNIH2Q6PI25 160 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 LINC00299Q6ZSB3 139 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 C6orf201Q7Z4U5 140 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 LURAP1LQ8IV03 231 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 Q8IYB0 196 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 IZUMO1Q8IYV9 350 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 ZNRF1Q8ND25 227 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 DEFB108BQ8NET1 73 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 OR10R2Q8NGX6 335 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 EMG1Q92979 244 aaKnown RBP8.2□□□□□ -1.1
SF3A1-207ENST00000471342 CCL13Q99616 98 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 HDHD3Q9BSH5 251 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-207ENST00000471342 TMEM59Q9BXS4 323 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 PECRQ9BY49 303 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 AUNIPQ9H7T9 357 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 HSF4Q9ULV5 492 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 PPIAL4AQ9Y536 164 aa8.2□□□□□ -1.1
SF3A1-207ENST00000471342 ARID1AO14497 2285 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 ABCA2Q9BZC7 2435 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 A0A0G2JMP0 313 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 A0A0X1KG70 313 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 PDCD6O75340 191 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 NXPH2O95156 264 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 IGHV2-5P01817 119 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 HIST1H1DP16402 221 aaKnown RBP8.19□□□□□ -1.1
SF3A1-207ENST00000471342 CAPZA1P52907 286 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 SNU13P55769 128 aaKnown RBP8.19□□□□□ -1.1
SF3A1-207ENST00000471342 ATP5J2P56134 94 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 DLX6P56179 175 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 TAS2R20P59543 309 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 MADCAM1Q13477 382 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 GPR176Q14439 515 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 RSU1Q15404 277 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 MPV17LQ2QL34 196 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 FAM53AQ6NSI3 398 aaPredicted RBP8.19□□□□□ -1.1
SF3A1-207ENST00000471342 PRSS57Q6UWY2 283 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 CIARTQ8N365 385 aaPredicted RBP8.19□□□□□ -1.1
SF3A1-207ENST00000471342 BPIFB2Q8N4F0 458 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 SUMF2Q8NBJ7 301 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 LY6G5BQ8NDX9 201 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 OR4M2Q8NGB6 313 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 CLDND2Q8NHS1 167 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 TRIM63Q969Q1 353 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 DCTN5Q9BTE1 182 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 FAAP24Q9BTP7 215 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 SRRQ9GZT4 340 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 DNTTIP1Q9H147 329 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 CXorf56Q9H5V9 222 aa8.19□□□□□ -1.1
SF3A1-207ENST00000471342 ZMAT3Q9HA38 289 aaKnown RBP8.19□□□□□ -1.1
SF3A1-207ENST00000471342 PATZ1Q9HBE1 687 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms