RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 UBIAD1Q9Y5Z9 338 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 A0A1W2PP64 1363 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 COL4A4P53420 1690 aaPredicted RBP3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 CEP152O94986 1710 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 IGHV1OR21-1A0A087WYE8 117 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 A0A1B0GV90 55 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 RBMY1BA6NDE4 496 aaKnown RBP3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 RBMY1EA6NEQ0 496 aaKnown RBP3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 ZNF726A6NNF4 738 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 MANBAO00462 879 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OR7C1O76099 320 aaPredicted RBP3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 AIFM1O95831 613 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OR10J4P0C629 311 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 RBMY1DP0C7P1 496 aaKnown RBP3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 RBMY1A1P0DJD3 496 aaKnown RBP3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OR13C7P0DN81 318 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 GZMHP20718 246 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OMGP23515 440 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 CXCR1P25024 350 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 PSMB9P28065 219 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 TSPOP30536 169 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 PFN2P35080 140 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OR3A4PP47883 348 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 TAS2R43P59537 309 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 CDC42P60953 191 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 NAA20P61599 178 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 PSG4Q00888 419 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 IFITM2Q01629 132 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 MXD1Q05195 221 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 BAXQ07812 192 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 ZNF266Q14584 549 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 RSU1Q15404 277 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 WHAMMP3Q1A5X7 153 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 TRMT12Q53H54 448 aaKnown RBP3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 FAM78BQ5VT40 261 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OTPQ5XKR4 325 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 KCTD16Q68DU8 428 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 ZNF571Q7Z3V5 609 aaPredicted RBP3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 LRRC18Q8N456 261 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OR1L8Q8NGR8 309 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OR6N1Q8NGY5 312 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OR1P1Q8NH06 330 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 OR13C6PQ8NH95 151 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 CLDN23Q96B33 292 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 LRRC58Q96CX6 371 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 ANKRD36BP1Q96IX9 119 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 PGLYRP4Q96LB8 373 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 FAAP24Q9BTP7 215 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 SLC25A39Q9BZJ4 359 aaPredicted RBP3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 VSIRQ9H7M9 311 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 SPRR3Q9UBC9 169 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 TP53TG5Q9Y2B4 290 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 POLR1DQ9Y2S0 133 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 SIGLEC9Q9Y336 463 aa3.45□□□□□ -1.86
PRPF40A-206ENST00000471167 NRCAMQ92823 1304 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 TAF1LQ8IZX4 1826 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 ADAMTSL3P82987 1691 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 TRAV8-4A0A0B4J246 113 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 FAM159BA6NKW6 160 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 UPK1BO75841 260 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 GPR75O95800 540 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 P01737 135 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 IGKV5-2P06315 115 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 MRPL3P09001 348 aaKnown RBP3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 IFI30P13284 250 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 ATF1P18846 271 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 ZBTB25P24278 435 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 AK4P27144 223 aaPredicted RBP3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 SERPINB5P36952 375 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 RPL29P47914 159 aaKnown RBP3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 REG1BP48304 166 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 CCR6P51684 374 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 SLC7A9P82251 487 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 CDK10Q15131 360 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 ZNF79Q15937 498 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 SNRNP35Q16560 246 aaKnown RBP3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 PRSS8Q16651 343 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 MICAQ29983 383 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 SFXN4Q6P4A7 337 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 SMARCD3Q6STE5 483 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 OAFQ86UD1 273 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 UBALD2Q8IYN6 164 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 TMEM86BQ8N661 226 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 COX18Q8N8Q8 333 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 OR9A2Q8NGT5 310 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 OR4X1Q8NH49 305 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 SPPL2BQ8TCT7 592 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 ZFP90Q8TF47 636 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 SDR42E1Q8WUS8 393 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 BLNKQ8WV28 456 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 SKA2Q8WVK7 121 aaPredicted RBP3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 CYGBQ8WWM9 190 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 FGF14Q92915 247 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 TMBIM1Q969X1 311 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 C9orf85Q96MD7 179 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 RGS18Q9NS28 235 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 CALYQ9NYX4 217 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 NCOA1Q15788 1441 aa3.44□□□□□ -1.86
PRPF40A-206ENST00000471167 IGSF23A1L1A6 192 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 PRORSD1PA6NEY8 169 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms