RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ARPC4P59998 168 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 ERVK11-1P61568 191 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 MPPED2Q15777 294 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 ATPAF1Q5TC12 328 aaPredicted RBP15.38■□□□□ 0.05
SMC4-211ENST00000469858 CD276Q5ZPR3 534 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 SLC22A25Q6T423 547 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 OR52B4Q8NGK2 314 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 NRIP2Q9BQI9 281 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 ZNF69Q9UC07 566 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 EDARQ9UNE0 448 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 NBEAQ8NFP9 2946 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 IGLV3-9A0A075B6K5 115 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 A0A1B0GWJ7 208 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 PLSCR5A0PG75 271 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 ZSCAN5BA6NJL1 495 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 CREBL2O60519 120 aaPredicted RBP15.37■□□□□ 0.05
SMC4-211ENST00000469858 PPP3CBP16298 524 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 PMELP40967 661 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 C17orf107Q6ZR85 190 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 C11orf53Q8IXP5 236 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 OR11H7Q8NGC8 314 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 CAPSLQ8WWF8 208 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 MRPL37Q9BZE1 423 aaKnown RBP15.37■□□□□ 0.05
SMC4-211ENST00000469858 PPA2Q9H2U2 334 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 CHMP1AQ9HD42 196 aaPredicted RBP15.37■□□□□ 0.05
SMC4-211ENST00000469858 ANXA10Q9UJ72 324 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 VSIG4Q9Y279 399 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 PKD1L2Q7Z442 2459 aa15.37■□□□□ 0.05
SMC4-211ENST00000469858 MCRIP1C9JLW8 97 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 HS3ST1O14792 307 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 TPD52L2O43399 206 aaKnown RBP15.36■□□□□ 0.05
SMC4-211ENST00000469858 ADORA2A-AS1P86434 159 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 SNTB1Q13884 538 aaKnown RBP15.36■□□□□ 0.05
SMC4-211ENST00000469858 SUMF2Q8NBJ7 301 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 POC1AQ8NBT0 407 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 NUP37Q8NFH4 326 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 RDH5Q92781 318 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 SPACA1Q9HBV2 294 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 CA10Q9NS85 328 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 ING3Q9NXR8 418 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 TAAR3PQ9P1P4 343 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 PLCE1Q9P212 2302 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 NBASA2RRP1 2371 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 hCG_1807616A0A1W2PRN6 198 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 NKX2-6A6NCS4 301 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 ZNF44P15621 663 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 SELENOVP59797 346 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 MZT1Q08AG7 82 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 CDK10Q15131 360 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 C4orf46Q504U0 113 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 ZNF626Q68DY1 528 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 OVCH2Q7RTZ1 564 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 TMEM17Q86X19 198 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 TERB2Q8NHR7 220 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 ELMOD3Q96FG2 381 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 MED30Q96HR3 178 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 TLNRD1Q9H1K6 362 aa15.36■□□□□ 0.05
SMC4-211ENST00000469858 TRAV24A0A0B4J272 114 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 H3BUI4 141 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 NKX2-5P52952 324 aaPredicted RBP15.35■□□□□ 0.05
SMC4-211ENST00000469858 WDR82Q6UXN9 313 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 Q6ZPA2 131 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 ZDHHC22Q8N966 263 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 MARCH1Q8TCQ1 289 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 CCDC107Q8WV48 283 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 ZNF286AQ9HBT8 521 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 ZNF222Q9UK12 451 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 ICE1Q9Y2F5 2266 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 SNRPGP15A8MWD9 76 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 DEGS1O15121 323 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 CXCL3P19876 107 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 NPY4RP50391 375 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 HOXA4Q00056 320 aaPredicted RBP15.35■□□□□ 0.05
SMC4-211ENST00000469858 ZFP69Q49AA0 526 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 ADAM5Q6NVV9 412 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 MRPL24Q96A35 216 aaKnown RBP15.35■□□□□ 0.05
SMC4-211ENST00000469858 ALX4Q9H161 411 aaPredicted RBP15.35■□□□□ 0.05
SMC4-211ENST00000469858 FN3KRPQ9HA64 309 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 NGBQ9NPG2 151 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 ATP23Q9Y6H3 246 aa15.35■□□□□ 0.05
SMC4-211ENST00000469858 WNT9BO14905 357 aa15.34■□□□□ 0.05
SMC4-211ENST00000469858 SPRY3O43610 288 aa15.34■□□□□ 0.05
SMC4-211ENST00000469858 NOS1APO75052 506 aaPredicted RBP15.34■□□□□ 0.05
SMC4-211ENST00000469858 ACAA1P09110 424 aaPredicted RBP15.34■□□□□ 0.05
SMC4-211ENST00000469858 OR4E1P0C645 316 aa15.34■□□□□ 0.05
SMC4-211ENST00000469858 FBXL19-AS1Q494R0 122 aa15.34■□□□□ 0.05
SMC4-211ENST00000469858 Q6P435 159 aa15.34■□□□□ 0.05
SMC4-211ENST00000469858 RNASE6Q93091 150 aaKnown RBP15.34■□□□□ 0.05
SMC4-211ENST00000469858 DPCDQ9BVM2 203 aaPredicted RBP15.34■□□□□ 0.05
SMC4-211ENST00000469858 WDR13Q9H1Z4 485 aa15.34■□□□□ 0.05
SMC4-211ENST00000469858 C1orf123Q9NWV4 160 aa15.34■□□□□ 0.05
SMC4-211ENST00000469858 DIDO1Q9BTC0 2240 aaKnown RBP15.34■□□□□ 0.05
SMC4-211ENST00000469858 SIRPB1O00241 398 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 OR2H2O95918 312 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 SULT1A3P0DMM9 295 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 SULT1A4P0DMN0 295 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 GRNP28799 593 aaKnown RBP15.33■□□□□ 0.05
SMC4-211ENST00000469858 RBMXP38159 391 aaKnown RBP15.33■□□□□ 0.05
SMC4-211ENST00000469858 CD200P41217 278 aa15.33■□□□□ 0.05
SMC4-211ENST00000469858 FIP1L1Q6UN15 594 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms