RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 DTX3Q8N9I9 347 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 MYCBPQ99417 103 aaPredicted RBP17.59■□□□□ 0.41
TTC28-204ENST00000468807 ISG20L2Q9H9L3 353 aaKnown RBP17.59■□□□□ 0.41
TTC28-204ENST00000468807 HMG20AQ9NP66 347 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 AMBNQ9NP70 447 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 PCDHGB5Q9Y5G0 923 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 IGHV2-26A0A0B4J1V2 119 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 IGKV1-12A0A0C4DH73 117 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 OR4C45A6NMZ5 311 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 IGKV1D-12P01611 117 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 HCKP08631 526 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 DBTP11182 482 aaKnown RBP17.58■□□□□ 0.4
TTC28-204ENST00000468807 JUNBP17275 347 aaPredicted RBP17.58■□□□□ 0.4
TTC28-204ENST00000468807 P2RX3P56373 397 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 KIAA2026Q5HYC2 2103 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 CCBE1Q6UXH8 406 aaPredicted RBP17.58■□□□□ 0.4
TTC28-204ENST00000468807 RNF144BQ7Z419 303 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 C9orf16Q9BUW7 83 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 CLEC7AQ9BXN2 247 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 TMEM133Q9H2Q1 129 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 ZCCHC4Q9H5U6 513 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 SEBOXQ9HB31 216 aaPredicted RBP17.58■□□□□ 0.4
TTC28-204ENST00000468807 ING3Q9NXR8 418 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 PITPNC1Q9UKF7 332 aa17.58■□□□□ 0.4
TTC28-204ENST00000468807 A6NDX4 124 aa17.57■□□□□ 0.4
TTC28-204ENST00000468807 PEX14O75381 377 aa17.57■□□□□ 0.4
TTC28-204ENST00000468807 OR2H2O95918 312 aa17.57■□□□□ 0.4
TTC28-204ENST00000468807 ZNF44P15621 663 aa17.57■□□□□ 0.4
TTC28-204ENST00000468807 GALEQ14376 348 aa17.57■□□□□ 0.4
TTC28-204ENST00000468807 C10orf67Q8IYJ2 551 aa17.57■□□□□ 0.4
TTC28-204ENST00000468807 Q96MT0 163 aa17.57■□□□□ 0.4
TTC28-204ENST00000468807 ZNF702PQ9H963 129 aa17.57■□□□□ 0.4
TTC28-204ENST00000468807 MYRFQ9Y2G1 1151 aa17.57■□□□□ 0.4
TTC28-204ENST00000468807 UBE2J1Q9Y385 318 aaPredicted RBP17.57■□□□□ 0.4
TTC28-204ENST00000468807 TRGV10A0A0A0MS01 117 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 E9PQ18 207 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 MPZL2O60487 215 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 MMP23AO75900 390 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 KDM4BO94953 1096 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 FADS2O95864 444 aaKnown RBP17.56■□□□□ 0.4
TTC28-204ENST00000468807 TMEM225BP0DP42 221 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 GABRB1P18505 474 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 AESQ08117 197 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 MINOS1Q5TGZ0 78 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 PRAMEF5Q5TYX0 476 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 ZBTB49Q6ZSB9 765 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 LYG1Q8N1E2 194 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 TSEN15Q8WW01 171 aaKnown RBP17.56■□□□□ 0.4
TTC28-204ENST00000468807 OR5M11Q96RB7 305 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 COMMD4Q9H0A8 199 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 GAL3ST2Q9H3Q3 398 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 MINOS1-NBL1R4GNA1 71 aa17.56■□□□□ 0.4
TTC28-204ENST00000468807 FUOMA2VDF0 154 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 MEGF11A6BM72 1044 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 FAM172BPA6NC97 362 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 MT-ND2P03891 347 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 ERP29P30040 261 aaKnown RBP17.55■□□□□ 0.4
TTC28-204ENST00000468807 LPCAT4Q643R3 524 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 SYS1Q8N2H4 156 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 OR5AK2Q8NH90 309 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 SLC29A1Q99808 456 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 CDCA4Q9BXL8 241 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 PRSS22Q9GZN4 317 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 ERVK13-1Q9NX77 482 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 DHDHQ9UQ10 334 aa17.55■□□□□ 0.4
TTC28-204ENST00000468807 TMEM212A6NML5 194 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 ZFPL1O95159 310 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 CDK2P24941 298 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 HTR1DP28221 377 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 GLIPR1P48060 266 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 NSUN5P1Q3KNT7 163 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 BAIAP2L2Q6UXY1 529 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 SERPINA12Q8IW75 414 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 OR5D14Q8NGL3 314 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 RHOXF1Q8NHV9 184 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 CFHR4Q92496 578 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 PDCD1LG2Q9BQ51 273 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 INPP5EQ9NRR6 644 aa17.54■□□□□ 0.4
TTC28-204ENST00000468807 A0A0G2JK05 382 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 LOC100130705A0A1B0GUX0 176 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 E9PI62 339 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 SULT1B1O43704 296 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 FBXO24O75426 580 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 CCDC159P0C7I6 412 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 GBX2P52951 348 aaPredicted RBP17.53■□□□□ 0.4
TTC28-204ENST00000468807 RAB40BQ12829 278 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 IL18R1Q13478 541 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 ATXN7L3Q14CW9 347 aaPredicted RBP17.53■□□□□ 0.4
TTC28-204ENST00000468807 KISS1Q15726 138 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 KRBOX4Q5JUW0 171 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 ABHD12Q8N2K0 398 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 S100A14Q9HCY8 104 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 SERTAD4Q9NUC0 356 aa17.53■□□□□ 0.4
TTC28-204ENST00000468807 RPL36Q9Y3U8 105 aaKnown RBP17.53■□□□□ 0.4
TTC28-204ENST00000468807 H3BUI4 141 aa17.52■□□□□ 0.4
TTC28-204ENST00000468807 HSPB6O14558 160 aa17.52■□□□□ 0.4
TTC28-204ENST00000468807 DEGS1O15121 323 aa17.52■□□□□ 0.4
TTC28-204ENST00000468807 DYNLT3P51808 116 aa17.52■□□□□ 0.4
TTC28-204ENST00000468807 MRPL28Q13084 256 aaKnown RBP17.52■□□□□ 0.4
TTC28-204ENST00000468807 OR52W1Q6IF63 320 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms