RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CLLU1OSQ5K130 101 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 MORN3Q6PF18 240 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-209ENST00000467124 MARCH3Q86UD3 253 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 SGPP2Q8IWX5 399 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 ST20-AS1Q8NBB2 130 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 OR5H2Q8NGV7 314 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 UBA3Q8TBC4 463 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 C2orf15Q8WU43 125 aaKnown RBP2.36□□□□□ -2.03
VPS13A-209ENST00000467124 MRAP2Q96G30 205 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 PPP1R36Q96LQ0 422 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 BIRC8Q96P09 236 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 TRNT1Q96Q11 434 aaKnown RBP2.36□□□□□ -2.03
VPS13A-209ENST00000467124 ING2Q9H160 280 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 OR52A5Q9H2C5 316 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 DSN1Q9H410 356 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 USH1CQ9Y6N9 552 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 TMEM94Q12767 1356 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 RPRD2Q5VT52 1461 aaKnown RBP2.35□□□□□ -2.03
VPS13A-209ENST00000467124 A0A1B0GX12 115 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF98A6NK75 572 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 ISLRO14498 428 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 GYG2O15488 501 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 FABP7O15540 132 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 RBBP9O75884 186 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 OR5AC1P0C628 307 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF14P17017 642 aaPredicted RBP2.35□□□□□ -2.03
VPS13A-209ENST00000467124 SLC6A1P30531 599 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 ZNHIT3Q15649 155 aaPredicted RBP2.35□□□□□ -2.03
VPS13A-209ENST00000467124 ATP6AP1LQ52LC2 224 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 TRMT10CQ7L0Y3 403 aaKnown RBP2.35□□□□□ -2.03
VPS13A-209ENST00000467124 NEGR1Q7Z3B1 354 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 RNF182Q8N6D2 247 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF555Q8NEP9 628 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 ATP6V1C2Q8NEY4 427 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 OR52N1Q8NH53 320 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 LLPHQ9BRT6 129 aaKnown RBP2.35□□□□□ -2.03
VPS13A-209ENST00000467124 ANGPTL4Q9BY76 406 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 PLA2G12AQ9BZM1 189 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 SLC19A3Q9BZV2 496 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 DHCR7Q9UBM7 475 aaKnown RBP2.35□□□□□ -2.03
VPS13A-209ENST00000467124 MAP3K19Q56UN5 1328 aa2.35□□□□□ -2.03
VPS13A-209ENST00000467124 BAZ2AQ9UIF9 1905 aaKnown RBP2.34□□□□□ -2.03
VPS13A-209ENST00000467124 IGLV2-18A0A075B6J9 118 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 TRAV8-3A0A0A6YYJ7 113 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 A0A1W2PRG6 482 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF233A6NK53 670 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 C16orf90A8MZG2 172 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 MKRN2OSH3BPM6 223 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 J3QLI3 93 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 UPK2O00526 184 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 CETN3O15182 167 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 UBDO15205 165 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 CALUO43852 315 aaPredicted RBP2.34□□□□□ -2.03
VPS13A-209ENST00000467124 PRTN3P24158 256 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 GTF2H1P32780 548 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 MPIP34949 423 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 PLTPP55058 493 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 FMODQ06828 376 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 BAXQ07812 192 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 SLAMF1Q13291 335 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 TTMPQ5BVD1 217 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 KPRPQ5T749 579 aaPredicted RBP2.34□□□□□ -2.03
VPS13A-209ENST00000467124 ELP2Q6IA86 826 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 XKRXQ6PP77 449 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 DGAT2L6Q6ZPD8 337 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 CRLF3Q8IUI8 442 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF561Q8N587 486 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF738Q8NE65 137 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 SLC26A10Q8NG04 563 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 OR8S1Q8NH09 359 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 TMEM56Q96MV1 263 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 YPEL4Q96NS1 127 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 PITX2Q99697 317 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 FAAP24Q9BTP7 215 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 THTPAQ9BU02 230 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 SUCNR1Q9BXA5 334 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 API5Q9BZZ5 524 aaKnown RBP2.34□□□□□ -2.03
VPS13A-209ENST00000467124 LHX5Q9H2C1 402 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 VSIRQ9H7M9 311 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 RDH14Q9HBH5 336 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 ZNHIT6Q9NWK9 470 aaKnown RBP2.34□□□□□ -2.03
VPS13A-209ENST00000467124 EURLQ9NYK6 297 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 TAC3Q9UHF0 121 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 SLC22A7Q9Y694 548 aa2.34□□□□□ -2.03
VPS13A-209ENST00000467124 LRPPRCP42704 1394 aaKnown RBP2.34□□□□□ -2.04
VPS13A-209ENST00000467124 SVILO95425 2214 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 LOXHD1Q8IVV2 1947 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 IZUMO1RA6ND01 250 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 C9JQL5 133 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 PDCD6O75340 191 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 ENTPD6O75354 484 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 ASS1P00966 412 aaKnown RBP2.33□□□□□ -2.04
VPS13A-209ENST00000467124 LIMS3P0CW19 117 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 LIMS4P0CW20 117 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 SCGB1C2P0DMR2 95 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 ZNF3P17036 446 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 GRPRP30550 384 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 HTR2BP41595 481 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 TGM4P49221 684 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 UBE2G2P60604 165 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms