RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 TECRQ9NZ01 308 aaKnown RBP4.79□□□□□ -1.64
LRCH3-212ENST00000466845 FBXL2Q9UKC9 423 aa4.79□□□□□ -1.64
LRCH3-212ENST00000466845 FZR1Q9UM11 496 aa4.79□□□□□ -1.64
LRCH3-212ENST00000466845 V9GYS6 101 aa4.79□□□□□ -1.64
LRCH3-212ENST00000466845 MYH2Q9UKX2 1941 aa4.79□□□□□ -1.64
LRCH3-212ENST00000466845 LAMB1P07942 1786 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 LY6G6EA0A0G2JKS1 128 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 FAM231BA6NCW3 169 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 YJEFN3A6XGL0 299 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 FOXI3A8MTJ6 420 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-212ENST00000466845 J3QRK9 145 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 MFNGO00587 321 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 PRKNO60260 465 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-212ENST00000466845 GRAP2O75791 330 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 CRYBA1P05813 215 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 H2BFMP0C1H6 154 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 SULT1A3P0DMM9 295 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 SULT1A4P0DMN0 295 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 PSG1P11464 419 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 IGFBP3P17936 291 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-212ENST00000466845 GLRXP35754 106 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 MDH2P40926 338 aaKnown RBP4.78□□□□□ -1.64
LRCH3-212ENST00000466845 ETV6P41212 452 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 PFN3P60673 137 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 OSTNP61366 133 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 CDK6Q00534 326 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 ZNF763Q0D2J5 394 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 EBPQ15125 230 aaKnown RBP4.78□□□□□ -1.64
LRCH3-212ENST00000466845 OR8B8Q15620 311 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 ATP6AP1LQ52LC2 224 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 UNC50Q53HI1 259 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 FAM74A1Q5RGS3 127 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 TMEM69Q5SWH9 247 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 TPTE2P1Q5T6R2 138 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 OTPQ5XKR4 325 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 AGTRAPQ6RW13 159 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 C12orf54Q6X4T0 127 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 ZNF534Q76KX8 674 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 CALHM3Q86XJ0 350 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 SLC35F2Q8IXU6 374 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 TCTE3Q8IZS6 198 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 RYBPQ8N488 228 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-212ENST00000466845 PRR26Q8N8Z3 221 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 ZNF485Q8NCK3 441 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 OR1L8Q8NGR8 309 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 OR13J1Q8NGT2 312 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 ARRDC2Q8TBH0 407 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 LCN9Q8WX39 176 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 ARL11Q969Q4 196 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 CLDN23Q96B33 292 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 HSFY1Q96LI6 401 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 CCDC115Q96NT0 180 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 NEDD4LQ96PU5 975 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 TP53RKQ96S44 253 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 RASL11BQ9BPW5 248 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 ZNF649Q9BS31 505 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 LXNQ9BS40 222 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 EBPLQ9BY08 206 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 NKX6-2Q9C056 277 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-212ENST00000466845 PRO1933Q9H354 126 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 SFXN1Q9H9B4 322 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 POLD4Q9HCU8 107 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 SAR1AQ9NR31 198 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 HRASLS2Q9NWW9 162 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 THYN1Q9P016 225 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 ST3GAL6Q9Y274 331 aa4.78□□□□□ -1.64
LRCH3-212ENST00000466845 PRSS51A0A1B0GVH4 220 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 TSPAN11A1L157 253 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 TRIM49D1C9J1S8 452 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 RGS16O15492 202 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-212ENST00000466845 RBFOX2O43251 390 aaKnown RBP eCLIP4.77□□□□□ -1.652e-11■■■■□ 23
LRCH3-212ENST00000466845 MRPS14O60783 128 aaKnown RBP4.77□□□□□ -1.65
LRCH3-212ENST00000466845 GCM2O75603 506 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-212ENST00000466845 NTN1O95631 604 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 HPRT1P00492 218 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 SEMG1P04279 462 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 GYPCP04921 128 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 SP1P08047 785 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 GM2AP17900 193 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 RPL35AP18077 110 aaKnown RBP4.77□□□□□ -1.65
LRCH3-212ENST00000466845 SDC1P18827 310 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 PSMB1P20618 241 aaKnown RBP4.77□□□□□ -1.65
LRCH3-212ENST00000466845 S100A2P29034 98 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 HOXD3P31249 432 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-212ENST00000466845 GABRA2P47869 451 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 TAS2R30P59541 319 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 ARG2P78540 354 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 RHOGP84095 191 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 PNRC1Q12796 327 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-212ENST00000466845 GINS1Q14691 196 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 LRRC26Q2I0M4 334 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 TMEM52BQ4KMG9 183 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 NHLRC3Q5JS37 347 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 C1orf194Q5T5A4 169 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 FAAP20Q6NZ36 180 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 SFXN4Q6P4A7 337 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 SPSB3Q6PJ21 355 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 C5orf24Q7Z6I8 188 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 IFNEQ86WN2 208 aa4.77□□□□□ -1.65
LRCH3-212ENST00000466845 WDR31Q8NA23 367 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms