RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 C1orf189Q5VU69 101 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 TCEAL6Q6IPX3 200 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 DOK3Q7L591 496 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 TMEM252Q8N6L7 170 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 OR13D1Q8NGV5 346 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 SNHG12Q9BXW3 62 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 TPSD1Q9BZJ3 242 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 NKX2-4Q9H2Z4 354 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 NECAP2Q9NVZ3 263 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 LRFN1Q9P244 771 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 PITPNC1Q9UKF7 332 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 KIAA2026Q5HYC2 2103 aa12.12□□□□□ -0.47
TGFBR3-204ENST00000465892 MKRN2OSH3BPM6 223 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 RNF4P78317 190 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 FOXF1Q12946 379 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 CLN3Q13286 438 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 SLC35E3Q7Z769 313 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 FGF14Q92915 247 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 NAT6Q93015 286 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 SMDT1Q9H4I9 107 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 A0A1B0GWJ7 208 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 XKRY2A2RUG3 117 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 ZNF814B7Z6K7 855 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 HSPA12AO43301 675 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 TMEM50AO95807 157 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 MTCP1P56278 107 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 VAMP2P63027 116 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 SMAD4Q13485 552 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 SLC10A1Q14973 349 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 SPIN3Q5JUX0 258 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 ZNF506Q5JVG8 444 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 SLC25A24Q6NUK1 477 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 THNSL2Q86YJ6 484 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 TMEM183AQ8IXX5 376 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 B3GAT1Q9P2W7 334 aa12.11□□□□□ -0.47
TGFBR3-204ENST00000465892 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 FAM90A2PQ658T7 463 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 PARM1Q6UWI2 310 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 SSC4DQ8WTU2 575 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 TMEM37Q8WXS4 190 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 HIST1H2AAQ96QV6 131 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 IGFLR1Q9H665 355 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 VSIRQ9H7M9 311 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 PTPRSQ13332 1948 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 EFNA2O43921 213 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 FAM189A2Q15884 450 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 OR4D5Q8NGN0 318 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 OR2AE1Q8NHA4 323 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 ZNF160Q9HCG1 818 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 LAMP3Q9UQV4 416 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 COL4A2P08572 1712 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 A6NNC1 897 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 ADAM20O43506 726 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 LBHQ53QV2 105 aaPredicted RBP12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 ZNF66Q6ZN08 573 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 MRGPRX1Q96LB2 322 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 PNRC2Q9NPJ4 139 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 COPS7AQ9UBW8 275 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 IL17BQ9UHF5 180 aa12.1□□□□□ -0.47
TGFBR3-204ENST00000465892 RALGAPA1Q6GYQ0 2036 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 OR2J2O76002 312 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 PAX1P15863 534 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 ECI1P42126 302 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 MYBPHQ13203 477 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 NOGQ13253 232 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 ADIRFQ15847 76 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 OR1P1Q8NH06 330 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 ZNF296Q8WUU4 475 aaPredicted RBP12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 RSG1Q9BU20 258 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 MRPL13Q9BYD1 178 aaKnown RBP12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 KIR2DS5A0A0G2JLQ3 304 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 A0A0G2JNG1 304 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 A0A1B0GU03 582 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 KIR2DS3K7RE56 304 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 DVL1O14640 695 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 TNFRSF10CO14798 259 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 CCL5P13501 91 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 AADACP22760 399 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 KIR2DS5Q14953 304 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 THEM4Q5T1C6 240 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 UEVLDQ8IX04 471 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 ODF3L1Q8IXM7 274 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 OR10A7Q8NGE5 316 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 TMEM234Q8WY98 164 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 PLEKHF2Q9H8W4 249 aa12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 UBE2J1Q9Y385 318 aaPredicted RBP12.09□□□□□ -0.47
TGFBR3-204ENST00000465892 C2orf16Q68DN1 1984 aa12.08□□□□□ -0.48
TGFBR3-204ENST00000465892 A0A1W2PR80 420 aa12.08□□□□□ -0.48
TGFBR3-204ENST00000465892 TLE4Q04727 773 aa12.08□□□□□ -0.48
TGFBR3-204ENST00000465892 ZFP36L1Q07352 338 aaKnown RBP12.08□□□□□ -0.48
TGFBR3-204ENST00000465892 RTP5Q14D33 572 aa12.08□□□□□ -0.48
TGFBR3-204ENST00000465892 ARL6IP1Q15041 203 aa12.08□□□□□ -0.48
TGFBR3-204ENST00000465892 ZNF695Q8IW36 515 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms