RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 CHST6Q9GZX3 395 aa7.76□□□□□ -1.17
USP39-212ENST00000465514 TMEM133Q9H2Q1 129 aa7.76□□□□□ -1.17
USP39-212ENST00000465514 IL36RNQ9UBH0 155 aa7.76□□□□□ -1.17
USP39-212ENST00000465514 LINC00312Q9Y6C7 94 aa7.76□□□□□ -1.17
USP39-212ENST00000465514 SESN1Q9Y6P5 492 aa7.76□□□□□ -1.17
USP39-212ENST00000465514 ALMS1Q8TCU4 4167 aa7.76□□□□□ -1.17
USP39-212ENST00000465514 A0A1W2PQL4 384 aaPredicted RBP7.75□□□□□ -1.17
USP39-212ENST00000465514 TCRBV4S1A1TA0A5B7 111 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 ZAR1LA6NP61 321 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 H3BUI4 141 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 GATBO75879 557 aaKnown RBP7.75□□□□□ -1.17
USP39-212ENST00000465514 MMP23AO75900 390 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 DNAJC8O75937 253 aaPredicted RBP7.75□□□□□ -1.17
USP39-212ENST00000465514 HAND1O96004 215 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 SERPINA3P01011 423 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 GABRR1P24046 479 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 AZGP1P25311 298 aaKnown RBP7.75□□□□□ -1.17
USP39-212ENST00000465514 DUSP1P28562 367 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 NPBWR2P48146 333 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 GRK1Q15835 563 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 C12orf73Q69YU5 71 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 CENPVQ7Z7K6 275 aaPredicted RBP7.75□□□□□ -1.17
USP39-212ENST00000465514 GID4Q8IVV7 300 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 ENTHD1Q8IYW4 607 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 EMG1Q92979 244 aaKnown RBP7.75□□□□□ -1.17
USP39-212ENST00000465514 UTP4Q969X6 686 aaKnown RBP7.75□□□□□ -1.17
USP39-212ENST00000465514 BORCS8Q96FH0 119 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 PRR25Q96S07 402 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 ADI1Q9BV57 179 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 CHST5Q9GZS9 411 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 SEBOXQ9HB31 216 aaPredicted RBP7.75□□□□□ -1.17
USP39-212ENST00000465514 KRT84Q9NSB2 600 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 POMPQ9Y244 141 aa7.75□□□□□ -1.17
USP39-212ENST00000465514 TSSC4Q9Y5U2 329 aaPredicted RBP7.75□□□□□ -1.17
USP39-212ENST00000465514 METTL15A6NJ78 407 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 GYG2O15488 501 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 PSPNO60542 156 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 APOL3O95236 402 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 CALCBP10092 127 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 BCL3P20749 454 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 CD24P25063 80 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 HTR1DP28221 377 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 SNU13P55769 128 aaKnown RBP7.74□□□□□ -1.17
USP39-212ENST00000465514 ZNF91Q05481 1191 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 IL18R1Q13478 541 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 KHDC1LQ5JSQ8 128 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 UNQ9370/PRO34162Q6UXP9 181 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 BAIAP2L2Q6UXY1 529 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 ZBTB49Q6ZSB9 765 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 TRAPPC6BQ86SZ2 158 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 MRPL41Q8IXM3 137 aaKnown RBP7.74□□□□□ -1.17
USP39-212ENST00000465514 Q8IYB0 196 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 FAM58AQ8N1B3 248 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 PRSS35Q8N3Z0 413 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 CCDC54Q8NEL0 328 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 OR4P4Q8NGL7 312 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 MYDGFQ969H8 173 aa7.74□□□□□ -1.17
USP39-212ENST00000465514 RBFOX1Q9NWB1 397 aaKnown RBP7.74□□□□□ -1.17
USP39-212ENST00000465514 ZMAT5Q9UDW3 170 aaKnown RBP7.74□□□□□ -1.17
USP39-212ENST00000465514 WARS2Q9UGM6 360 aaKnown RBP7.74□□□□□ -1.17
USP39-212ENST00000465514 HECTD4Q9Y4D8 3996 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 TRBV2A0A0J9YWF9 115 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 LOC107986453A0A1B0GWG9 222 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 G3V2T6 193 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 MGST3O14880 152 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 ENTPD6O75354 484 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 SULT1C4O75897 302 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 JTBO76095 146 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 CYB5AP00167 134 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 OR2T7P0C7T2 308 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 PRKACAP17612 351 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 CHATP28329 748 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 ERP29P30040 261 aaKnown RBP7.73□□□□□ -1.17
USP39-212ENST00000465514 HTR1FP30939 366 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 KIR3DL2P43630 455 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 OR3A1P47881 315 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 POU3F4P49335 361 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 RBP2P50120 134 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 ATP1B3P54709 279 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 MTCP1P56278 107 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 P2RX3P56373 397 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 ZNF146Q15072 292 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 DNAL1Q4LDG9 190 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 ABCA11PQ4W5N1 156 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 PRAMEF5Q5TYX0 476 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 KDM4DQ6B0I6 523 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 ETV3LQ6ZN32 361 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 C16orf82Q7Z2V1 217 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 RDH10Q8IZV5 341 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 ABHD12Q8N2K0 398 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 DNAAF1Q8NEP3 725 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 OR10H4Q8NGA5 316 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 CAPSLQ8WWF8 208 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 PP6455Q8WZ26 134 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 STMN2Q93045 179 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 C10orf35Q96D05 121 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 AKR1E2Q96JD6 320 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 CITED4Q96RK1 184 aa7.73□□□□□ -1.17
USP39-212ENST00000465514 MCRIP2Q9BUT9 160 aaKnown RBP7.73□□□□□ -1.17
USP39-212ENST00000465514 LIN7BQ9HAP6 207 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms