RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ZPBPQ9BS86 351 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 STRADBQ9C0K7 418 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 SLC7A10Q9NS82 523 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 ATPIF1Q9UII2 106 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 PRELID3BQ9Y3B1 194 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 POMT1Q9Y6A1 747 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 A0A096LPE4 126 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 A0A1W2PPZ6 126 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 ST8SIA3O43173 380 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 GPR137BO60478 399 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 PMELP40967 661 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 ARF1P84077 181 aaKnown RBP15.8■□□□□ 0.12
SYNE4-204ENST00000465425 GPR157Q5UAW9 335 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 MEX3BQ6ZN04 569 aaKnown RBP15.8■□□□□ 0.12
SYNE4-204ENST00000465425 RAB11FIP2Q7L804 512 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 OR52M1Q8NGK5 317 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 PSMF1Q92530 271 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 RSRP1Q9BUV0 290 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 FAM86C1Q9NVL1 165 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 B4GALT7Q9UBV7 327 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 TMED3Q9Y3Q3 217 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 JMJD7P0C870 316 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 ID4P47928 161 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 DVL1P1P54792 670 aaPredicted RBP15.79■□□□□ 0.12
SYNE4-204ENST00000465425 IL13RA2Q14627 380 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 COLCA1Q6ZS62 124 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 FAM173AQ9BQD7 235 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 IGKV3D-15A0A087WSY6 115 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 TSPAN15O95858 294 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 CD5P06127 495 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 HAAOP46952 286 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 P2RY1P47900 373 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 GNMTQ14749 295 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 IGSF11Q5DX21 431 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 SLC35G3Q8N808 338 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 EXTL1Q92935 676 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 POM121Q96HA1 1249 aa15.79■□□□□ 0.12
SYNE4-204ENST00000465425 PARP12Q9H0J9 701 aaKnown RBP15.79■□□□□ 0.12
SYNE4-204ENST00000465425 C5orf49A4QMS7 147 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 RPL36A-HNRNPH2H7BZ11 118 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 OR8U9P0C7N5 309 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 PRDX4Q13162 271 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 ABHD17BQ5VST6 288 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 Q6ZPA2 131 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 MRPL21Q7Z2W9 205 aaKnown RBP15.78■□□□□ 0.12
SYNE4-204ENST00000465425 OR2M7Q8NG81 312 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 OR8U1Q8NH10 309 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 SLAMF9Q96A28 289 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 TAAR9Q96RI9 348 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 TP53RKQ96S44 253 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 LINC00470Q9BZP3 86 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 SAV1Q9H4B6 383 aaPredicted RBP15.78■□□□□ 0.12
SYNE4-204ENST00000465425 CALHM2Q9HA72 323 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 PLA2G2EQ9NZK7 142 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 C3orf85A0A1B0GTC6 90 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A10PA6NDY2 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A18PA6NE21 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A16PA6NEW6 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A20PA6NIJ5 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 C19orf67A6NJJ6 358 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A8PA6NJQ4 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A7PA6NKC0 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A22PA8MWA6 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A12PA8MX19 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A5PA8MXJ8 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A23PA8MXZ1 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 SYNGR4O95473 234 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A15PP0C7V4 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 SEC11BP0C7V7 166 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A13PP0C7W8 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A14PP0C7W9 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 FAM90A24PP0C7X0 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 CCL2P13500 99 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 BCL3P20749 454 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 GPM6AP51674 278 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 SRPXP78539 464 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 ZNF616Q08AN1 781 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 SPIN3Q5JUX0 258 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 TUSC5Q8IXB3 177 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 KIRREL1Q96J84 757 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 REPIN1Q9BWE0 567 aaKnown RBP15.78■□□□□ 0.12
SYNE4-204ENST00000465425 ZNF703Q9H7S9 590 aaPredicted RBP15.78■□□□□ 0.12
SYNE4-204ENST00000465425 COL6A3P12111 3177 aa15.78■□□□□ 0.12
SYNE4-204ENST00000465425 MUC3AQ02505 3323 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 PQLC2LA1A4F0 135 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 MPPED1O15442 326 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 HLA-HP01893 362 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 TK1P04183 234 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 LHX2P50458 406 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 DPPA2Q7Z7J5 298 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 FAM185AQ8N0U4 392 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 BSCL2Q96G97 398 aaPredicted RBP15.77■□□□□ 0.12
SYNE4-204ENST00000465425 PRRG4Q9BZD6 226 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 PLSCR2Q9NRY7 297 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 LUZP4Q9P127 313 aa15.77■□□□□ 0.12
SYNE4-204ENST00000465425 NEURL1O76050 574 aa15.77■□□□□ 0.11
SYNE4-204ENST00000465425 GLAP06280 429 aa15.77■□□□□ 0.11
SYNE4-204ENST00000465425 ZDHHC23Q8IYP9 409 aa15.77■□□□□ 0.11
SYNE4-204ENST00000465425 LYPD6BQ8NI32 183 aa15.77■□□□□ 0.11
SYNE4-204ENST00000465425 SIGLEC12Q96PQ1 595 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms