RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	IGKV1D-17	A0A075B6S4	117 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155		A0A0G2JMP0	313 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155		A0A0X1KG70	313 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	SIRPB1	O00241	398 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	PPIH	O43447	177 aa	Known RBP	11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	PDCD6	O75340	191 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	GYPA	P02724	150 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	GNB3	P16520	340 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	CHAT	P28329	748 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	PRDX2	P32119	198 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	ETV6	P41212	452 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	GABRA2	P47869	451 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	PTH2R	P49190	550 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	BTG1	P62324	171 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	ZMYND11	Q15326	602 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	PLAC9	Q5JTB6	97 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	STUM	Q69YW2	141 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	BRICD5	Q6PL45	260 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	C6orf201	Q7Z4U5	140 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	CD177	Q8N6Q3	437 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	ZNF525	Q8N782	197 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	OR4M2	Q8NGB6	313 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	S100Z	Q8WXG8	99 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	CYYR1	Q96J86	154 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	PLEKHJ1	Q9NW61	149 aa		11.21	□□□□□ -0.61
ATF3-208	ENST00000465155	HSPB6	O14558	160 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	PTHLH	P12272	177 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	PAX1	P15863	534 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	HIST1H1D	P16402	221 aa	Known RBP	11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	FUT3	P21217	361 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	CDNF	Q49AH0	187 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	AVPI1	Q5T686	147 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	BAIAP2L2	Q6UXY1	529 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	SNX29P2	Q8IUI4	249 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	MFSD4A	Q8N468	514 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	ANGPTL6	Q8NI99	470 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	TIMD4	Q96H15	378 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	SOST	Q9BQB4	213 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	PECR	Q9BY49	303 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	GSX2	Q9BZM3	304 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	IFT22	Q9H7X7	185 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	BARX1	Q9HBU1	254 aa	Predicted RBP	11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNF222	Q9UK12	451 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	NBPF19	A0A087WUL8	3843 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	CENPE	Q02224	2701 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	TRAV24	A0A0B4J272	114 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	ISPD	A4D126	451 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	SLC33A1	O00400	549 aa	Predicted RBP	11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	IGHV2-70	P01814	119 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	HLA-DQB1	P01920	261 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	DNASE1	P24855	282 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	MNDA	P41218	407 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	NR4A2	P43354	598 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	TMEM33	P57088	247 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNF45	Q02386	682 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	COL10A1	Q03692	680 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNF79	Q15937	498 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNF260	Q3ZCT1	412 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	OLFML2A	Q68BL7	652 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	PYHIN1	Q6K0P9	492 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	BPIFB2	Q8N4F0	458 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	SUMF2	Q8NBJ7	301 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	RAB1C	Q92928	201 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	GCDH	Q92947	438 aa	Predicted RBP	11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	ABHD1	Q96SE0	405 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	SULT4A1	Q9BR01	284 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	FAAP24	Q9BTP7	215 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	SPACA1	Q9HBV2	294 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	TMEM165	Q9HC07	324 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	RCC2	Q9P258	522 aa	Known RBP	11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	ELF5	Q9UKW6	265 aa	Predicted RBP	11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	HSF4	Q9ULV5	492 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	KCNK7	Q9Y2U2	307 aa		11.2	□□□□□ -0.62
ATF3-208	ENST00000465155	UBE2QL1	A1L167	161 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	TMEM235	A6NFC5	223 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	MCRIP1	C9JLW8	97 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155		H3BUI4	141 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	MFNG	O00587	321 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	PSPN	O60542	156 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	INHBB	P09529	407 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	AMY2B	P19961	511 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	MDH2	P40926	338 aa	Known RBP	11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	GPR6	P46095	362 aa	Predicted RBP	11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	PITPNA	Q00169	270 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	KCNJ8	Q15842	424 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	PYDC2	Q56P42	97 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	PAN3	Q58A45	887 aa	Known RBP	11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	ASCC1	Q8N9N2	400 aa	Known RBP	11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	NEK7	Q8TDX7	302 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	CCL13	Q99616	98 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	TMEM246	Q9BRR3	403 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	DPCD	Q9BVM2	203 aa	Predicted RBP	11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	PPA2	Q9H2U2	334 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNF665	Q9H7R5	613 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	AUNIP	Q9H7T9	357 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155	CSMD2	Q7Z408	3487 aa		11.19	□□□□□ -0.62
ATF3-208	ENST00000465155		A0A1B0GW55	424 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	NKX6-3	A6NJ46	265 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms