RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 CECR9P0C854 216 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 GTF2H1P32780 548 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 GCLMP48507 274 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 XKP51811 444 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 RAB38P57729 211 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 DSTNP60981 165 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 FMODQ06828 376 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 BAXQ07812 192 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 DHRS2Q13268 280 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 GPR176Q14439 515 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 KRTAP25-1Q3LHN0 102 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 PDZD11Q5EBL8 140 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 LIN9Q5TKA1 542 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 RESP18Q5W5W9 173 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF660Q6AZW8 331 aaPredicted RBP0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF773Q6PK81 442 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 SMARCD3Q6STE5 483 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 UGT2A3Q6UWM9 527 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 Q6ZQT7 251 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 TMEM25Q86YD3 366 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 AMN1Q8IY45 258 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 ST13P4Q8IZP2 240 aaPredicted RBP0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 ZIC4Q8N9L1 334 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 Q8NAQ8 132 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 ACBD4Q8NC06 268 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 LY6G5BQ8NDX9 201 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 OR2K2Q8NGT1 345 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 DOK4Q8TEW6 326 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 BLNKQ8WV28 456 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 FXYD5Q96DB9 178 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 PYURFQ96I23 114 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 YPEL4Q96NS1 127 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 OLFM3Q96PB7 478 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 CIB1Q99828 191 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 B9D2Q9BPU9 175 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 PLA2G12AQ9BZM1 189 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 POMKQ9H5K3 350 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 VCX3AQ9NNX9 186 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 SDHAF3Q9NRP4 125 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 ASF1BQ9NVP2 202 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 MAT2BQ9NZL9 334 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 RBMX2Q9Y388 322 aaKnown RBP0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 TRAPPC1Q9Y5R8 145 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF706Q9Y5V0 76 aaPredicted RBP0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 IGLV10-54A0A075B6I4 117 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 RBFOX3A6NFN3 312 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF729A6NN14 1252 aaPredicted RBP0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 F8VP50 259 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 TMEM250H0YL14 139 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 hCG_2039718K7EN88 272 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 NDUFS8O00217 210 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 CDIPTO14735 213 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 TCF21O43680 179 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 MYO1DO94832 1006 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 CST4P01036 141 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 TRGV3P03979 118 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 IGKV5-2P06315 115 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 SOD3P08294 240 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 CCL2P13500 99 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 M6PRP20645 277 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 CCNOP22674 350 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 ELK4P28324 431 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 TSPOP30536 169 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 TGFBR2P37173 567 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 LGALS7P47929 136 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 KCNJ3P48549 501 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 KLF3P57682 345 aaPredicted RBP0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 C1QTNF8P60827 252 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 PRKCDQ05655 676 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 BNIP2Q12982 314 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 CASP8Q14790 479 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 CYHR1Q6ZMK1 362 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 GALNT10Q86SR1 603 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 MARCH3Q86UD3 253 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 CYP4Z1Q86W10 505 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 CDRT4Q8N9R6 151 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 CMTM2Q8TAZ6 248 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 ACTL9Q8TC94 416 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 RBPMSQ93062 196 aaKnown RBP0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 MAL2Q969L2 176 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 APOBEC3DQ96AK3 386 aaPredicted RBP0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 C19orf60Q96EN9 201 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 MSANTD3Q96H12 275 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 FMC1Q96HJ9 113 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 GLT1D1Q96MS3 346 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF75AQ96N20 296 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 HINT2Q9BX68 163 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 SUCNR1Q9BXA5 334 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF436Q9C0F3 470 aaPredicted RBP0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 TXNIPQ9H3M7 391 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 MFSD1Q9H3U5 465 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 DIABLOQ9NR28 239 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF230Q9UIE0 474 aaPredicted RBP0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 NXT1Q9UKK6 140 aaKnown RBP0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 USH1CQ9Y6N9 552 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF780BQ9Y6R6 833 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 ICOSQ9Y6W8 199 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF407Q9C0G0 2248 aa0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 POLR3AO14802 1390 aaPredicted RBP0.82□□□□□ -2.28
NUCKS1-202ENST00000464938 DHX57Q6P158 1386 aaKnown RBP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms