RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 VAPBO95292 243 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 WISP3O95389 354 aaPredicted RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 HLA-HP01893 362 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 METTL15P1P0C7V9 234 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 UCHL3P15374 230 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 SDC4P31431 198 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 TNFSF9P41273 254 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 SERPINB10P48595 397 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 IDH2P48735 452 aaKnown RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ACOT2P49753 483 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 SYNJ2BPP57105 145 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 RAB25P57735 213 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 LINC00315P59091 139 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 CDC42P60953 191 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 RAB5BP61020 215 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 IRF8Q02556 426 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 LOXL1Q08397 574 aaPredicted RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 OR4D1Q15615 310 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 GRK1Q15835 563 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 PSG3Q16557 428 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 KRTAP13-3Q3SY46 172 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 LINC00483Q53H64 154 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 C5orf47Q569G3 176 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 AVPI1Q5T686 147 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 C9orf64Q5T6V5 341 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 LPCAT4Q643R3 524 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 MED27Q6P2C8 311 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 IZUMO2Q6UXV1 221 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 SPNS3Q6ZMD2 512 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 Q6ZR03 302 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 UBALD2Q8IYN6 164 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 FAM71AQ8IYT1 594 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ZFP82Q8N141 532 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 C4orf33Q8N1A6 199 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 C12orf45Q8N5I9 185 aaPredicted RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ATPAF2Q8N5M1 289 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 GATSQ8NAP1 163 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 OR10AD1Q8NGE0 317 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 OR51D1Q8NGF3 324 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 OR9A2Q8NGT5 310 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 OR4K15Q8NH41 348 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ITFG1Q8TB96 612 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ACTL9Q8TC94 416 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 PIFOQ8TCI5 191 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 DYNC2LI1Q8TCX1 351 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 CA5BP1Q8WTZ4 195 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 FRZBQ92765 325 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ZNF707Q96C28 371 aaPredicted RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 JSRP1Q96MG2 331 aaPredicted RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 STACQ99469 402 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 TIMM17AQ99595 171 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 PHB2Q99623 299 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 NIPSNAP1Q9BPW8 284 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 DCUN1D5Q9BTE7 237 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 HINT2Q9BX68 163 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 OSBPL11Q9BXB4 747 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 NXF2Q9GZY0 626 aaKnown RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 EFCAB1Q9HAE3 211 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 NMNAT1Q9HAN9 279 aaPredicted RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 EDA2RQ9HAV5 297 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 TMBIM4Q9HC24 238 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ANKHQ9HCJ1 492 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 SIRT7Q9NRC8 400 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 AGPAT4Q9NRZ5 378 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ZNF355PQ9NSJ1 428 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 CLN6Q9NWW5 311 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 DDIT4Q9NX09 232 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 MED11Q9P086 117 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 SLC17A7Q9P2U7 560 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ZNF282Q9UDV7 671 aaPredicted RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 NDRG2Q9UN36 371 aaKnown RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 SSR3Q9UNL2 185 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 MMACHCQ9Y4U1 282 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 PTPRTO14522 1441 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 PCF11O94913 1555 aaKnown RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 TTC37Q6PGP7 1564 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 CHD1O14646 1710 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ARHGEF10O15013 1369 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 CDK13Q14004 1512 aaKnown RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 MYH11P35749 1972 aa2.21□□□□□ -2.05
HMGXB4-205ENST00000464480 LRP4O75096 1905 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 A0A087WXM4 84 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 A0A1W2PQL4 384 aaPredicted RBP2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 FABP12A6NFH5 140 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF705GA8MUZ8 300 aaPredicted RBP2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 KLRC4-KLRK1H3BQV0 150 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 H7C417 338 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 ARPC5O15511 151 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 PSMG1O95456 288 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 FADS2O95864 444 aaKnown RBP2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 HPRT1P00492 218 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 SERPINA1P01009 418 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 IFNA7P01567 189 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 RPN2P04844 631 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 OR56A5P0C7T3 313 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 UBCP0CG48 685 aaKnown RBP2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 PET100P0DJ07 73 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 IL7P13232 177 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 GTF2F2P13984 249 aa2.21□□□□□ -2.06
HMGXB4-205ENST00000464480 TCN2P20062 427 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms