RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PHYHIPLQ96FC7 376 aa7.98□□□□□ -1.13
HPS4-208ENST00000464362 SLC2A9Q9NRM0 540 aa7.98□□□□□ -1.13
HPS4-208ENST00000464362 WNT16Q9UBV4 365 aa7.98□□□□□ -1.13
HPS4-208ENST00000464362 TCF20Q9UGU0 1960 aaKnown RBP7.97□□□□□ -1.13
HPS4-208ENST00000464362 IGHV3-43A0A0B4J1X8 118 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 C7orf77A4D0Y5 90 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 RNF212BA8MTL3 300 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 RAMP1O60894 148 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 MT-CO2P00403 227 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 PDGFBP01127 241 aaPredicted RBP7.97□□□□□ -1.13
HPS4-208ENST00000464362 IGHV3-43DP0DP04 118 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 MGST1P10620 155 aaKnown RBP7.97□□□□□ -1.13
HPS4-208ENST00000464362 NPBWR1P48145 328 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 RGS7BPQ6MZT1 257 aaPredicted RBP7.97□□□□□ -1.13
HPS4-208ENST00000464362 JMJD6Q6NYC1 403 aaPredicted RBP7.97□□□□□ -1.13
HPS4-208ENST00000464362 ERGIC1Q969X5 290 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 ADGRG7Q96K78 797 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 AKIRIN1Q9H9L7 192 aaPredicted RBP7.97□□□□□ -1.13
HPS4-208ENST00000464362 CACNG5Q9UF02 275 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 PTPRDP23468 1912 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 FANCMQ8IYD8 2048 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 C3orf85A0A1B0GTC6 90 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 MDFIC2A0A1B0GVS7 189 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 A8MXE2 369 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 PCP4P48539 62 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 PRDX4Q13162 271 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 RAB35Q15286 201 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 CEBPEQ15744 281 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 ZNF260Q3ZCT1 412 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 NHLRC3Q5JS37 347 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 DHRS13Q6UX07 377 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 ZNF573Q86YE8 665 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 RAB39BQ96DA2 213 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 MUCL1Q96DR8 90 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 OR10C1Q96KK4 312 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 ZNF488Q96MN9 340 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 RTN4RQ9BZR6 473 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 PRO1933Q9H354 126 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 STRAPQ9Y3F4 350 aaKnown RBP7.97□□□□□ -1.13
HPS4-208ENST00000464362 A0A1W2PQD3 144 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 DVL1O14640 695 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 ENSAO43768 121 aaKnown RBP7.97□□□□□ -1.13
HPS4-208ENST00000464362 TSPAN2O60636 221 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 CYTIPO60759 359 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 MUC1P15941 1255 aaPredicted RBP7.97□□□□□ -1.13
HPS4-208ENST00000464362 RUNX1Q01196 453 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 BAGE3Q86Y29 109 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 BAGE2Q86Y30 109 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 UBAC2Q8NBM4 344 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 ASB13Q8WXK3 278 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 RTL8AQ9BWD3 113 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 ADAM19Q9H013 955 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 ARRDC1-AS1Q9H2J1 176 aa7.97□□□□□ -1.13
HPS4-208ENST00000464362 NUDT19A8MXV4 375 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 MS4A18H0YCH9 400 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 MPPED1O15442 326 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 FABP4P15090 132 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 EPHA8P29322 1005 aaPredicted RBP7.96□□□□□ -1.13
HPS4-208ENST00000464362 RAC1P63000 192 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 OR8B8Q15620 311 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 MS4A18Q3C1V0 323 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 KCNIP4Q6PIL6 250 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 ZNF705AQ6ZN79 300 aaPredicted RBP7.96□□□□□ -1.13
HPS4-208ENST00000464362 ZNF610Q8N9Z0 462 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 CADM4Q8NFZ8 388 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 OR10P1Q8NGE3 313 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 TRIB1Q96RU8 372 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 GPX7Q96SL4 187 aaPredicted RBP7.96□□□□□ -1.13
HPS4-208ENST00000464362 NPDC1Q9NQX5 325 aaPredicted RBP7.96□□□□□ -1.13
HPS4-208ENST00000464362 CCL28Q9NRJ3 127 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 LOC285556D6RIA3 1793 aa7.96□□□□□ -1.13
HPS4-208ENST00000464362 TRBV5-7A0A0A0MS05 114 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 NKX2-6A6NCS4 301 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 SPINT2O43291 252 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 CTXN2P0C2S0 81 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 SLC25A4P12235 298 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 ZBTB25P24278 435 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 CALCRP30988 508 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 B2MP61769 119 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 ZNF154Q13106 437 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 TGIF1Q15583 401 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 RNF151Q2KHN1 245 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 SMRP1Q8NCR6 262 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 H1FXQ92522 213 aaKnown RBP7.96□□□□□ -1.14
HPS4-208ENST00000464362 ZNF501Q96CX3 271 aaPredicted RBP7.96□□□□□ -1.14
HPS4-208ENST00000464362 SLC35B3Q9H1N7 401 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 DUSP15Q9H1R2 295 aaPredicted RBP7.96□□□□□ -1.14
HPS4-208ENST00000464362 GPR27Q9NS67 375 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 PIPOXQ9P0Z9 390 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 A0A0J9YW62 118 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 GDF9O60383 454 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 NDUFB7P17568 137 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 FHITP49789 147 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 C9orf152Q5JTZ5 239 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 TMPRSS7Q7RTY8 843 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 LINC00518Q8N0U6 118 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 ZNF485Q8NCK3 441 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 OR13G1Q8NGZ3 307 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 ADIPOR1Q96A54 375 aa7.96□□□□□ -1.14
HPS4-208ENST00000464362 SLC25A22Q9H936 323 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms