RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 USP24Q9UPU5 2620 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 CCL21O00585 134 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 SFT2D2O95562 160 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 AP2S1P53680 142 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-205ENST00000464187 P2RX3P56373 397 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 SUPT4H1P63272 117 aaKnown RBP12.43□□□□□ -0.42
COL5A1-205ENST00000464187 PDZK1IP1Q13113 114 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 PIGYQ3MUY2 71 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 ALKAL2Q6UX46 152 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 ZSCAN4Q8NAM6 433 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-205ENST00000464187 PXT1Q8NFP0 134 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 SCGB3A2Q96PL1 93 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 TECTBQ96PL2 329 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 KIF25Q9UIL4 384 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 COL6A6A6NMZ7 2263 aa12.43□□□□□ -0.42
COL5A1-205ENST00000464187 NBASA2RRP1 2371 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 ZNF850A8MQ14 1090 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 GEMIN2O14893 280 aaKnown RBP12.42□□□□□ -0.42
COL5A1-205ENST00000464187 CALCRP30988 508 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 SERPINF1P36955 418 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 SLC9A3R2Q15599 337 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 TOR2AQ5JU69 321 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 ZNF660Q6AZW8 331 aaPredicted RBP12.42□□□□□ -0.42
COL5A1-205ENST00000464187 CLEC18BQ6UXF7 455 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 OSR2Q8N2R0 312 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 OR56B2PQ8NGI1 322 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 SCARB1Q8WTV0 552 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 SULT4A1Q9BR01 284 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 ELOVL5Q9NYP7 299 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 RDH8Q9NYR8 311 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 CRIM1Q9NZV1 1036 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 GPR160Q9UJ42 338 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 STARD10Q9Y365 291 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 CACNA1BQ00975 2339 aa12.42□□□□□ -0.42
COL5A1-205ENST00000464187 IGLV1-44P01699 117 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 SFTPBP07988 381 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 RRASP10301 218 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 MALLQ13021 153 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 ZNF345Q14585 488 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 CALHM1Q8IU99 346 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 FBXL14Q8N1E6 418 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 KCNRGQ8N5I3 272 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 OR10AD1Q8NGE0 317 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 DYRK2Q92630 601 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 REPIN1Q9BWE0 567 aaKnown RBP12.41□□□□□ -0.42
COL5A1-205ENST00000464187 OR51B6Q9H340 312 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 CDH20Q9HBT6 801 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 PRR13Q9NZ81 148 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 A0A0B4J2A0 478 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 A0A0D9SG52 128 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 RNF222A6NCQ9 220 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 C5orf51A6NDU8 294 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 CECR9P0C854 216 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 RPS2P15880 293 aaKnown RBP12.41□□□□□ -0.42
COL5A1-205ENST00000464187 GLRA1P23415 457 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 DTYMKP23919 212 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 CCKARP32238 428 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 ARPC4P59998 168 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 ATXN7L3Q14CW9 347 aaPredicted RBP12.41□□□□□ -0.42
COL5A1-205ENST00000464187 ANKRD55Q3KP44 614 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 RFPL4BQ6ZWI9 263 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 SLC51BQ86UW2 128 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 FAM169BQ8N8A8 192 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 MUCL1Q96DR8 90 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 MRPS24Q96EL2 167 aaKnown RBP12.41□□□□□ -0.42
COL5A1-205ENST00000464187 CMSS1Q9BQ75 279 aaKnown RBP12.41□□□□□ -0.42
COL5A1-205ENST00000464187 FGF23Q9GZV9 251 aaPredicted RBP12.41□□□□□ -0.42
COL5A1-205ENST00000464187 SHPKQ9UHJ6 478 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 ANXA10Q9UJ72 324 aa12.41□□□□□ -0.42
COL5A1-205ENST00000464187 ESPL1Q14674 2120 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 PCNX1Q96RV3 2341 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 ADGRG4Q8IZF6 3080 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 C16orf97H3BN30 126 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 SMPD2O60906 423 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 OR2F2O95006 317 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 SPDEFO95238 335 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 FCGR3AP08637 254 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 NMBP08949 121 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 RBM11P57052 281 aaKnown RBP12.4□□□□□ -0.42
COL5A1-205ENST00000464187 OR2F1Q13607 317 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 SURF2Q15527 256 aaPredicted RBP12.4□□□□□ -0.42
COL5A1-205ENST00000464187 AANATQ16613 207 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 ALKBH2Q6NS38 261 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 MRPL21Q7Z2W9 205 aaKnown RBP12.4□□□□□ -0.42
COL5A1-205ENST00000464187 ZNF611Q8N823 705 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 OR5L1Q8NGL2 311 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 OR51F2Q8NH61 342 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 COQ8AQ8NI60 647 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 PAPOLGQ9BWT3 736 aaKnown RBP12.4□□□□□ -0.42
COL5A1-205ENST00000464187 EDARQ9UNE0 448 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 ST3GAL6Q9Y274 331 aa12.4□□□□□ -0.42
COL5A1-205ENST00000464187 IGHV1-18A0A0C4DH31 117 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 C13orf42A0A1B0GVH6 325 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 PQLC2LA1A4F0 135 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 J3QW42 95 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 PGAM2P15259 253 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 UBA52P62987 128 aaKnown RBP12.39□□□□□ -0.43
COL5A1-205ENST00000464187 PRDX4Q13162 271 aa12.39□□□□□ -0.43
COL5A1-205ENST00000464187 DAZAP2Q15038 168 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-205ENST00000464187 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms