RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 OCM2P0CE71 109 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 OCMP0CE72 109 aaPredicted RBP11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 DUSP1P28562 367 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 IL18R1Q13478 541 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 KPRPQ5T749 579 aaPredicted RBP11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 OR52W1Q6IF63 320 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 ZFP1Q6P2D0 407 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 RTN4RL2Q86UN3 420 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 TMEM219Q86XT9 240 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 C1QL4Q86Z23 238 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 TPRX1Q8N7U7 411 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 C11orf44Q8N8P7 122 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 WIPF2Q8TF74 440 aaPredicted RBP11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 CORO2AQ92828 525 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 PELI1Q96FA3 418 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 WNT10AQ9GZT5 417 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 COMMD4Q9H0A8 199 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 GAL3ST2Q9H3Q3 398 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 EXOSC4Q9NPD3 245 aaKnown RBP11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 TAS2R3Q9NYW6 316 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 PCDHGB5Q9Y5G0 923 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 TRGV10A0A0A0MS01 117 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 IGKV1-12A0A0C4DH73 117 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 H3BNX3 289 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 J3QLW9 94 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 PLXNB1O43157 2135 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 FBXO24O75426 580 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 OR2H2O95918 312 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 IGKV1D-12P01611 117 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 ZNF19P17023 458 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 HTR1DP28221 377 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 SLC34A1Q06495 639 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 ALKBH1Q13686 389 aaKnown RBP11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 HABP2Q14520 560 aaPredicted RBP11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 BEAN1Q3B7T3 259 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 HEPN1Q6WQI6 88 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 TRAPPC6BQ86SZ2 158 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 NDUFA11Q86Y39 141 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 SYS1Q8N2H4 156 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 CHST4Q8NCG5 386 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 OR13C3Q8NGS6 347 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 OR10AC1Q8NH08 325 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 NDNFQ8TB73 568 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 LGALS12Q96DT0 336 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 GSTK1Q9Y2Q3 226 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 HILPDAQ9Y5L2 63 aa11.55□□□□□ -0.56
SNRNP40-203ENST00000463988 SIRPB1O00241 398 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 MPZL2O60487 215 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 CSN2P05814 226 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 GABRB1P18505 474 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 CD34P28906 385 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 BDH1Q02338 343 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 MRPL28Q13084 256 aaKnown RBP11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 GALEQ14376 348 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 ZIK1Q3SY52 487 aaPredicted RBP11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 SAMD5Q5TGI4 173 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 C16orf82Q7Z2V1 217 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 C10orf67Q8IYJ2 551 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 ABHD12Q8N2K0 398 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 OR51A4Q8NGJ6 313 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 OR4P4Q8NGL7 312 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 OR13C9Q8NGT0 318 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 ZNF596Q8TC21 504 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 C4orf36Q96KX1 117 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 Q96MT0 163 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 ZCCHC4Q9H5U6 513 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 INPP5EQ9NRR6 644 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 DPM3Q9P2X0 92 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 KIAA2026Q5HYC2 2103 aa11.54□□□□□ -0.56
SNRNP40-203ENST00000463988 G3V4G9 280 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 XPNPEP2O43895 674 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 MMP23AO75900 390 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 FADS2O95864 444 aaKnown RBP11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 IGLV1-47P01700 117 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 CALCBP10092 127 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 CD28P10747 220 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 CDK2P24941 298 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 SNU13P55769 128 aaKnown RBP11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 BLCAPP62952 87 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 SERPINA12Q8IW75 414 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 CBR4Q8N4T8 237 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 PARP16Q8N5Y8 322 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 OR5D14Q8NGL3 314 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 RHOXF1Q8NHV9 184 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 HAVCR2Q8TDQ0 301 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 RFT1Q96AA3 541 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 CREB3L1Q96BA8 519 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 AKR1E2Q96JD6 320 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 ALG8Q9BVK2 526 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 GMPPBQ9Y5P6 360 aa11.53□□□□□ -0.56
SNRNP40-203ENST00000463988 A0A087X0M5 115 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 A0A1B0GX30 115 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 ODAMA1E959 279 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 TMEM212A6NML5 194 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 LEUTXA8MZ59 168 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 SULT1B1O43704 296 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 PEX14O75381 377 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 DBTP11182 482 aaKnown RBP11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 ZNF44P15621 663 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 JUNBP17275 347 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms