RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 APOL3O95236 402 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 FCGR1AP12314 374 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 IGLL1P15814 213 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 JUNBP17275 347 aaPredicted RBP12.34□□□□□ -0.43
SKA3-204ENST00000462482 BCL3P20749 454 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 EPHA2P29317 976 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 MNDAP41218 407 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 SLC35A2P78381 396 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 CD83Q01151 205 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 ZNF146Q15072 292 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 KHDC1LQ5JSQ8 128 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 FOXB2Q5VYV0 432 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 Q6ZS46 218 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 CCDC121Q6ZUS5 278 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 TCF23Q7RTU1 214 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 OR4P4Q8NGL7 312 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 SPSB1Q96BD6 273 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 IL36RNQ9UBH0 155 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 GSTK1Q9Y2Q3 226 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 ENTPD6O75354 484 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 MPIG6BO95866 241 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 CALCBP10092 127 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 ATF1P18846 271 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 CDK2P24941 298 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 OR3A1P47881 315 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 NPBWR2P48146 333 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 PRRX1P54821 245 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 BDH1Q02338 343 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 TP53I3Q53FA7 332 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 PRAMEF5Q5TYX0 476 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 CCDC144NLQ6NUI1 221 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 HEPN1Q6WQI6 88 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 UTS2BQ765I0 119 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 KCTD20Q7Z5Y7 419 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 RDH10Q8IZV5 341 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 PRSS35Q8N3Z0 413 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 OR4D6Q8NGJ1 314 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 FGGYQ96C11 551 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 SLC25A33Q9BSK2 321 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 GABARAPL1Q9H0R8 117 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 RIBC2Q9H4K1 309 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 HMG20AQ9NP66 347 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 TAS2R3Q9NYW6 316 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 AP4S1Q9Y587 144 aa12.33□□□□□ -0.44
SKA3-204ENST00000462482 M0QZK8 103 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 OR2F2O95006 317 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 DUS4LO95620 317 aaKnown RBP12.32□□□□□ -0.44
SKA3-204ENST00000462482 OR2H2O95918 312 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 LPLP06858 475 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 ZNF44P15621 663 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 CD24P25063 80 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 PTGFRP43088 359 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 SCN1BQ07699 218 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 PDZK1IP1Q13113 114 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 ABCA11PQ4W5N1 156 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 C9orf152Q5JTZ5 239 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 BCAS4Q8TDM0 211 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 SLC7A6OSQ96CW6 309 aaPredicted RBP12.32□□□□□ -0.44
SKA3-204ENST00000462482 ADAT3Q96EY9 351 aaPredicted RBP12.32□□□□□ -0.44
SKA3-204ENST00000462482 MRPL48Q96GC5 212 aaKnown RBP12.32□□□□□ -0.44
SKA3-204ENST00000462482 RCC1LQ96I51 464 aaKnown RBP12.32□□□□□ -0.44
SKA3-204ENST00000462482 OPALINQ96PE5 141 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 MYCBPQ99417 103 aaPredicted RBP12.32□□□□□ -0.44
SKA3-204ENST00000462482 CIB1Q99828 191 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 GPR61Q9BZJ8 451 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 IMPAD1Q9NX62 359 aa12.32□□□□□ -0.44
SKA3-204ENST00000462482 DAPL1A0PJW8 107 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 MMP23AO75900 390 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 KIR3DL2P43630 455 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 RASSF2P50749 326 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 RBM39Q14498 530 aaKnown RBP12.31□□□□□ -0.44
SKA3-204ENST00000462482 AMIGO2Q86SJ2 522 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 CHST4Q8NCG5 386 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 OR2G2Q8NGZ5 317 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 DPF1Q92782 380 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 CORO2AQ92828 525 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 MYDGFQ969H8 173 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 EME1Q96AY2 570 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 RBM14Q96PK6 669 aaKnown RBP12.31□□□□□ -0.44
SKA3-204ENST00000462482 RHOFQ9HBH0 211 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 PCDHB16Q9NRJ7 776 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 HHLA2Q9UM44 414 aa12.31□□□□□ -0.44
SKA3-204ENST00000462482 IGKV1-9A0A0C4DH69 117 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 ODAMA1E959 279 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 OOSP1A8MZH6 123 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 HTR1AP08908 422 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 FAM106CPP0CH98 169 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 GLIPR1P48060 266 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 AESQ08117 197 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 BNIP1Q12981 228 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 KRBOX4Q5JUW0 171 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 C1orf146Q5VVC0 180 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 OR13C3Q8NGS6 347 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 RFT1Q96AA3 541 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.3□□□□□ -0.44
SKA3-204ENST00000462482 ING3Q9NXR8 418 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 OR6C3Q9NZP0 311 aa12.3□□□□□ -0.44
SKA3-204ENST00000462482 AMMECR1Q9Y4X0 333 aaPredicted RBP12.3□□□□□ -0.44
SKA3-204ENST00000462482 ORC6Q9Y5N6 252 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms