RNA–Protein interactions for RNA: ENST00000462135.1

STX1A-206, Transcript of syntaxin 1A, human

TSL 3

Gene STX1A, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STX1A-206	ENST00000462135	ZNF826P	Q6ZT77	177 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	C6orf201	Q7Z4U5	140 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	TRAPPC6B	Q86SZ2	158 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	MOGAT3	Q86VF5	341 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	GCSAM	Q8N6F7	178 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	ZNF488	Q96MN9	340 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	ZMAT3	Q9HA38	289 aa	Known RBP	10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	C12orf4	Q9NQ89	552 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	UFSP2	Q9NUQ7	469 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	COPZ2	Q9P299	210 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	KLK11	Q9UBX7	282 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	PPP1R3C	Q9UQK1	317 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	CACNG2	Q9Y698	323 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	RELN	P78509	3460 aa		10.13	□□□□□ -0.79
STX1A-206	ENST00000462135	TRBV6-6	A0A0A6YYG2	114 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	DEGS1	O15121	323 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	HAND1	O96004	215 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	DANCR	P0C864	163 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	AKAIN1	P0CW23	69 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	MUC1	P15941	1255 aa	Predicted RBP	10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	GUCA2A	Q02747	115 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	MEF2D	Q14814	521 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	ZMYND11	Q15326	602 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	TRIM16L	Q309B1	348 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	NKAPL	Q5M9Q1	402 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	HOGA1	Q86XE5	327 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	GAPT	Q8N292	157 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	DUSP18	Q8NEJ0	188 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	NUDCD2	Q8WVJ2	157 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	NEU4	Q8WWR8	484 aa	Predicted RBP	10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	GCDH	Q92947	438 aa	Predicted RBP	10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	CMSS1	Q9BQ75	279 aa	Known RBP	10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	SULT4A1	Q9BR01	284 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	RAB1B	Q9H0U4	201 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	DNTTIP1	Q9H147	329 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	IFT46	Q9NQC8	304 aa		10.12	□□□□□ -0.79
STX1A-206	ENST00000462135	TRAV24	A0A0B4J272	114 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	ZNF736	B4DX44	427 aa	Predicted RBP	10.11	□□□□□ -0.79
STX1A-206	ENST00000462135		J3QKU1	62 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	NAPSA	O96009	420 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	CSN2	P05814	226 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	PTHLH	P12272	177 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	SLC6A1	P30531	599 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	TAS2R46	P59540	309 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	CCL8	P80075	99 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	TLE4	Q04727	773 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	ATAD3C	Q5T2N8	411 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	TEX36	Q5VZQ5	186 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	C20orf204	Q6ZNR8	217 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	DCDC5	Q6ZRR9	648 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	GDPD3	Q7L5L3	318 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	MOB1B	Q7L9L4	216 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	CENPS	Q8N2Z9	138 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	SUMF2	Q8NBJ7	301 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	FAAP24	Q9BTP7	215 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	DPCD	Q9BVM2	203 aa	Predicted RBP	10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	DLL4	Q9NR61	685 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	NLK	Q9UBE8	527 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	AK3	Q9UIJ7	227 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	MGAT4A	Q9UM21	535 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	WIPI2	Q9Y4P8	454 aa		10.11	□□□□□ -0.79
STX1A-206	ENST00000462135	OR2AT4	A6NND4	320 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	SLC33A1	O00400	549 aa	Predicted RBP	10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	OR2H2	O95918	312 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	RNF224	P0DH78	156 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	PLA2G2A	P14555	144 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	ZNF44	P15621	663 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	RFX2	P48378	723 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	MICB	Q29980	383 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	RNASE12	Q5GAN4	147 aa	Known RBP	10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	VAX1	Q5SQQ9	334 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	STEAP1B	Q6NZ63	245 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135		Q6ZNX1	250 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	PPP1R35	Q8TAP8	253 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	ENKUR	Q8TC29	256 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	WDR13	Q9H1Z4	485 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	NCOR1P1	Q9H4R4	102 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	HRASLS	Q9HDD0	168 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	SLC2A8	Q9NY64	477 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	IL36RN	Q9UBH0	155 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	DNAJB11	Q9UBS4	358 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	ZNF222	Q9UK12	451 aa		10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	ELF5	Q9UKW6	265 aa	Predicted RBP	10.1	□□□□□ -0.79
STX1A-206	ENST00000462135	LRRK2	Q5S007	2527 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	TRAV38-1	A0A0B4J264	116 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	IGHV1-69-2	A0A0G2JMI3	117 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	IGHV3-64D	A0A0J9YX35	117 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	FAM240B	A0A1B0GVZ2	78 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	OOEP	A6NGQ2	149 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	TMEM178B	H3BS89	294 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	LGALS8	O00214	317 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	WNT9B	O14905	357 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	NDUFA2	O43678	99 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	DIRAS3	O95661	229 aa		10.09	□□□□□ -0.79
STX1A-206	ENST00000462135	RAB3D	O95716	219 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms