RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ZNF286AQ9HBT8 521 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 LIPGQ9Y5X9 500 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 NPIPA2E9PIF3 369 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 NPIPA3F8WFD2 350 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 CXCL1P09341 107 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 NDUFA6P56556 154 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 C9orf152Q5JTZ5 239 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 WDR74Q6RFH5 385 aaPredicted RBP15.97■□□□□ 0.15
HPS3-204ENST00000462030 BATF2Q8N1L9 274 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 SMRP1Q8NCR6 262 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 OR14L1PQ8NHC6 308 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 Q8WTZ3 238 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 NTNG2Q96CW9 530 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 CHCHD2Q9Y6H1 151 aaPredicted RBP15.97■□□□□ 0.15
HPS3-204ENST00000462030 WDR87Q6ZQQ6 2873 aa15.97■□□□□ 0.15
HPS3-204ENST00000462030 HSD17B6O14756 317 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 CRYGSP22914 178 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 TAGLN2P37802 199 aaKnown RBP15.96■□□□□ 0.15
HPS3-204ENST00000462030 RBP2P50120 134 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 HERV-K104P61576 105 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 ULBP2Q9BZM5 246 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 ZNF700Q9H0M5 742 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 MAGT1Q9H0U3 335 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 ST3GAL6Q9Y274 331 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 URGCP-MRPS24S4R325 110 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 NDUFS6O75380 124 aaKnown RBP15.96■□□□□ 0.15
HPS3-204ENST00000462030 SCRG1O75711 98 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 SRP19P09132 144 aaKnown RBP15.96■□□□□ 0.15
HPS3-204ENST00000462030 ZNF266Q14584 549 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 CNN3Q15417 329 aaKnown RBP15.96■□□□□ 0.15
HPS3-204ENST00000462030 C5orf24Q7Z6I8 188 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 OSR2Q8N2R0 312 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 CCDC71LQ8N9Z2 235 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 DEFB126Q9BYW3 111 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 SMDT1Q9H4I9 107 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 DOK5Q9P104 306 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 DMRT1Q9Y5R6 373 aa15.96■□□□□ 0.15
HPS3-204ENST00000462030 C3orf85A0A1B0GTC6 90 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 ATXN7O15265 892 aaPredicted RBP15.95■□□□□ 0.14
HPS3-204ENST00000462030 SSSCA1O60232 199 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 PITX3O75364 302 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 CDX1P47902 265 aaPredicted RBP15.95■□□□□ 0.14
HPS3-204ENST00000462030 UCP3P55916 312 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 ZNF774Q6NX45 483 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 CCDC54Q8NEL0 328 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 BCO1Q9HAY6 547 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 GLRX2Q9NS18 164 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 FOXD3Q9UJU5 478 aaPredicted RBP15.95■□□□□ 0.14
HPS3-204ENST00000462030 PPYP01298 95 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 CELA2AP08217 269 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 NKX2-1P43699 371 aaPredicted RBP15.95■□□□□ 0.14
HPS3-204ENST00000462030 UBE2KP61086 200 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 ELOBQ15370 118 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 ZNF674Q2M3X9 581 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 ASCL4Q6XD76 172 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 GPHA2Q96T91 129 aa15.95■□□□□ 0.14
HPS3-204ENST00000462030 TRDCB7Z8K6 153 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 SLC33A1O00400 549 aaPredicted RBP15.94■□□□□ 0.14
HPS3-204ENST00000462030 MPPED1O15442 326 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 LCATP04180 440 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 PATE4P0C8F1 98 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 EPHA1P21709 976 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 ERVFRD-1P60508 538 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 DLK1P80370 383 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 RUNX1Q01196 453 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 ODF3L1Q8IXM7 274 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 MAML2Q8IZL2 1156 aaPredicted RBP15.94■□□□□ 0.14
HPS3-204ENST00000462030 CYB561D1Q8N8Q1 229 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 OR5C1Q8NGR4 320 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 KIAA1456Q9P272 454 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 CEP192Q8TEP8 1941 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 CCDC163A0A0D9SF12 145 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 PROB1E7EW31 1015 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 SYNGR3O43761 229 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 ICAM4Q14773 271 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 CXorf66Q5JRM2 361 aaPredicted RBP15.94■□□□□ 0.14
HPS3-204ENST00000462030 RAET1LQ5VY80 246 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 SPNS3Q6ZMD2 512 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 LHFPL2Q6ZUX7 228 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 TMEM252Q8N6L7 170 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 ZIC4Q8N9L1 334 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 AKIRIN1Q9H9L7 192 aaPredicted RBP15.94■□□□□ 0.14
HPS3-204ENST00000462030 SLC7A11Q9UPY5 501 aa15.94■□□□□ 0.14
HPS3-204ENST00000462030 G3V3Y1 287 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 CST7O76096 145 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 NXPH3O95157 252 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 CDS2O95674 445 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 NRASP01111 189 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 FAM27BQ5VT28 67 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 ZNF600Q6ZNG1 722 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 ZNF429Q86V71 674 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 TMEM222Q9H0R3 208 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 HS3ST3B1Q9Y662 390 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 KIAA1549Q9HCM3 1950 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 TGIF2-C20orf24A0A0A6YYL0 155 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 ZNF729A6NN14 1252 aaPredicted RBP15.93■□□□□ 0.14
HPS3-204ENST00000462030 WRBO00258 174 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 GATCO43716 136 aaKnown RBP15.93■□□□□ 0.14
HPS3-204ENST00000462030 PDCD6O75340 191 aa15.93■□□□□ 0.14
HPS3-204ENST00000462030 SCAF4O95104 1147 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms