RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TRBV2A0A0J9YWF9 115 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 TMEM212A6NML5 194 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 SIRPB1O00241 398 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 DEGS1O15121 323 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 IGHV1-8P0DP01 117 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 DBTP11182 482 aaKnown RBP7.22□□□□□ -1.25
LDB1-203ENST00000461873 MYL12AP19105 171 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 BCL3P20749 454 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 MYF6P23409 242 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 BRS3P32247 399 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 HSPA13P48723 471 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 PROK1P58294 105 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 RAB40BQ12829 278 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 ALKBH1Q13686 389 aaKnown RBP7.22□□□□□ -1.25
LDB1-203ENST00000461873 ZNF273Q14593 569 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 HERPUD1Q15011 391 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 SLC25A30Q5SVS4 291 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 ZNF691Q5VV52 312 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 TTC23Q5W5X9 447 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 TMPRSS11AQ6ZMR5 421 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 Q6ZSR3 168 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 LHFPL3Q86UP9 236 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 PRSS35Q8N3Z0 413 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 OR4D6Q8NGJ1 314 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 OR13C9Q8NGT0 318 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 FAM110DQ8TAY7 271 aaPredicted RBP7.22□□□□□ -1.25
LDB1-203ENST00000461873 CNIH3Q8TBE1 160 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 ZNF596Q8TC21 504 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 RFT1Q96AA3 541 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 CREB3L1Q96BA8 519 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 CDCA4Q9BXL8 241 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 PRSS22Q9GZN4 317 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 FAM192AQ9GZU8 254 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 Q9H521 79 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 PCDHB16Q9NRJ7 776 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 RBFOX1Q9NWB1 397 aaKnown RBP7.22□□□□□ -1.25
LDB1-203ENST00000461873 ING3Q9NXR8 418 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 PLA2G2EQ9NZK7 142 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 FRRS1LQ9P0K9 344 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 UBE2J1Q9Y385 318 aaPredicted RBP7.22□□□□□ -1.25
LDB1-203ENST00000461873 HILPDAQ9Y5L2 63 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 LINC00312Q9Y6C7 94 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 SESN1Q9Y6P5 492 aa7.22□□□□□ -1.25
LDB1-203ENST00000461873 TET2Q6N021 2002 aaPredicted RBP7.22□□□□□ -1.25
LDB1-203ENST00000461873 MEX3AA1L020 520 aaKnown RBP7.21□□□□□ -1.26
LDB1-203ENST00000461873 C17orf98A8MV24 154 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 E9PQ18 207 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 CALCBP10092 127 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 RAB3AP20336 220 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 HTR1DP28221 377 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 DUSP1P28562 367 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 CEACAM3P40198 252 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 MNDAP41218 407 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 KIR2DS4P43632 304 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 PRRX1P54821 245 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 ERVK11-1P61568 191 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 PPP3R1P63098 170 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 PDZK1IP1Q13113 114 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 GALEQ14376 348 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 SMN1Q16637 294 aaKnown RBP7.21□□□□□ -1.26
LDB1-203ENST00000461873 MINOS1Q5TGZ0 78 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 LAIR2Q6ISS4 152 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 RTN4RL2Q86UN3 420 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 C8orf59Q8N0T1 100 aaPredicted RBP7.21□□□□□ -1.26
LDB1-203ENST00000461873 SYS1Q8N2H4 156 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 ZNF565Q8N9K5 539 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 CHST4Q8NCG5 386 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 OR5D18Q8NGL1 313 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 ADAT3Q96EY9 351 aaPredicted RBP7.21□□□□□ -1.26
LDB1-203ENST00000461873 RDH12Q96NR8 316 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 NR1H4Q96RI1 486 aaPredicted RBP7.21□□□□□ -1.26
LDB1-203ENST00000461873 CLEC7AQ9BXN2 247 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 EXOGQ9Y2C4 368 aaKnown RBP7.21□□□□□ -1.26
LDB1-203ENST00000461873 MINOS1-NBL1R4GNA1 71 aa7.21□□□□□ -1.26
LDB1-203ENST00000461873 TENM1Q9UKZ4 2725 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 IGKV1-27A0A075B6S5 117 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 SULT1B1O43704 296 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 IGHA1P01876 353 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 CSTBP04080 98 aaKnown RBP7.2□□□□□ -1.26
LDB1-203ENST00000461873 ERP29P30040 261 aaKnown RBP7.2□□□□□ -1.26
LDB1-203ENST00000461873 C21orf33P30042 268 aaPredicted RBP7.2□□□□□ -1.26
LDB1-203ENST00000461873 PTGFRP43088 359 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 KIR3DL2P43630 455 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 NPBWR2P48146 333 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 P2RX3P56373 397 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 ISL1P61371 349 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 EMX1Q04741 257 aaPredicted RBP7.2□□□□□ -1.26
LDB1-203ENST00000461873 ZNF91Q05481 1191 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 ZNF146Q15072 292 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 RSU1Q15404 277 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 KRBOX4Q5JUW0 171 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 ASPHD2Q6ICH7 369 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 FDX2Q6P4F2 183 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 SAXO1Q8IYX7 474 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 ABHD12Q8N2K0 398 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 KLHDC1Q8N7A1 406 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 TPRX1Q8N7U7 411 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 BPIFB6Q8NFQ5 453 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 OR4S1Q8NGB4 309 aa7.2□□□□□ -1.26
LDB1-203ENST00000461873 C17orf50Q8WW18 174 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms