RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 FAM90A22PA8MWA6 464 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 J3QLW9 94 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 SH2D1BO14796 132 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 INMTO95050 263 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 FADS2O95864 444 aaKnown RBP7.39□□□□□ -1.23
BRCA1-207ENST00000461798 IGKV1D-12P01611 117 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 ARG1P05089 322 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 DBTP11182 482 aaKnown RBP7.39□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF19P17023 458 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF20P17024 532 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 DUSP1P28562 367 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 OR3A1P47881 315 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 POU3F4P49335 361 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 P2RX3P56373 397 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 RAB40BQ12829 278 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 GRK1Q15835 563 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 C2orf68Q2NKX9 166 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 CCBE1Q6UXH8 406 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-207ENST00000461798 ZBTB49Q6ZSB9 765 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 Q6ZTK2 550 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 CCDC121Q6ZUS5 278 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 LHFPL3Q86UP9 236 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 PARP16Q8N5Y8 322 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 OR4S1Q8NGB4 309 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 OR51A4Q8NGJ6 313 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 OR10AC1Q8NH08 325 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 OR2T6Q8NHC8 308 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 HAVCR2Q8TDQ0 301 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 C4orf36Q96KX1 117 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 C9orf16Q9BUW7 83 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 COMMD4Q9H0A8 199 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 TMEM133Q9H2Q1 129 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 ZCCHC4Q9H5U6 513 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 NEK6Q9HC98 313 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 S100A14Q9HCY8 104 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 IL36RNQ9UBH0 155 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 AASSQ9UDR5 926 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 PITPNC1Q9UKF7 332 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 MYRFQ9Y2G1 1151 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 SIGLEC9Q9Y336 463 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 UBE2J1Q9Y385 318 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-207ENST00000461798 SESN1Q9Y6P5 492 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 LOC100130705A0A1B0GUX0 176 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 FUOMA2VDF0 154 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 ZFPL1O95159 310 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 TSPAN15O95858 294 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 CSN2P05814 226 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 PRKACAP17612 351 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 GABRR1P24046 479 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 RAB13P51153 203 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 EDDM3AQ14507 147 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 SSX2Q16385 188 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 KLHL22Q53GT1 634 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF529Q6P280 563 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 Q6P435 159 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 RNF144BQ7Z419 303 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 RTN4RL2Q86UN3 420 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 SERPINA12Q8IW75 414 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF676Q8N7Q3 588 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 CHST4Q8NCG5 386 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 Q8NFD4 153 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 OR5D14Q8NGL3 314 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 OR13C3Q8NGS6 347 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 OR13C9Q8NGT0 318 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 RPS4Y2Q8TD47 263 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 WIPF2Q8TF74 440 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-207ENST00000461798 ALG8Q9BVK2 526 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 JAM3Q9BX67 310 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 NCOR1P1Q9H4R4 102 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF702PQ9H963 129 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 ISG20L2Q9H9L3 353 aaKnown RBP7.38□□□□□ -1.23
BRCA1-207ENST00000461798 EXOSC4Q9NPD3 245 aaKnown RBP7.38□□□□□ -1.23
BRCA1-207ENST00000461798 SERTAD4Q9NUC0 356 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 FAM118AQ9NWS6 357 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 ERVK13-1Q9NX77 482 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 TAS2R3Q9NYW6 316 aa7.38□□□□□ -1.23
BRCA1-207ENST00000461798 RPL36Q9Y3U8 105 aaKnown RBP7.38□□□□□ -1.23
BRCA1-207ENST00000461798 IGHV2-26A0A0B4J1V2 119 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 A0A0G2JK05 382 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 MEX3AA1L020 520 aaKnown RBP7.37□□□□□ -1.23
BRCA1-207ENST00000461798 TMEM212A6NML5 194 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 E9PI62 339 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 MMP23AO75900 390 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 OR2H2O95918 312 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 CSF1P09603 554 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 CCDC159P0C7I6 412 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 CD34P28906 385 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 ZP1P60852 638 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 BDH1Q02338 343 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 DYNC1I2Q13409 638 aaKnown RBP7.37□□□□□ -1.23
BRCA1-207ENST00000461798 KISS1Q15726 138 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 FAM189A2Q15884 450 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 LPCAT4Q643R3 524 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 ELP2Q6IA86 826 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 OR52W1Q6IF63 320 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 HEPN1Q6WQI6 88 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 ASCL4Q6XD76 172 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 PQLC1Q8N2U9 271 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 KLHDC1Q8N7A1 406 aa7.37□□□□□ -1.23
BRCA1-207ENST00000461798 TPRX1Q8N7U7 411 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms