RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 SGCZQ96LD1 299 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 C12orf57Q99622 126 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 ULBP2Q9BZM5 246 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 SLC25A31Q9H0C2 315 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 C11orf1Q9H5F2 150 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 ESRP2Q9H6T0 727 aaKnown RBP5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 ZNF701Q9NV72 531 aaPredicted RBP5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 PLEK2Q9NYT0 353 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 PLA2G2EQ9NZK7 142 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 AK3Q9UIJ7 227 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 SLC7A11Q9UPY5 501 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 MSRB2Q9Y3D2 182 aa5.32□□□□□ -1.56
UBQLN4-202ENST00000459954 DNAH14Q0VDD8 3507 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 MED12Q93074 2177 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 IGKV1D-8A0A087WSZ0 117 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 A0A087WWC5 75 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 NSG1A0A0A6YYJ2 146 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 hCG_38984A0A1B0GV85 526 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 A0A1W2PQM1 296 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 ZNF850A8MQ14 1090 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 LINC01387J3KSC0 135 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 HSPA12AO43301 675 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 PDCD6O75340 191 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 PITX3O75364 302 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 NDUFS6O75380 124 aaKnown RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 FARS2O95363 451 aaKnown RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 TIAF1O95411 115 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 NRASP01111 189 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 S100A9P06702 114 aaKnown RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 CTXN2P0C2S0 81 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 COX5BP10606 129 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 SLC25A6P12236 298 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 TCN2P20062 427 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 FUT3P21217 361 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 GABRR1P24046 479 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 CCL7P80098 99 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 HGFACQ04756 655 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 ZFP36L1Q07352 338 aaKnown RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 BAXQ07812 192 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 MALLQ13021 153 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 HABP2Q14520 560 aaPredicted RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 ESPL1Q14674 2120 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 GNMTQ14749 295 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 OR8G1Q15617 311 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 PHYHD1Q5SRE7 291 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 SP5Q6BEB4 398 aaPredicted RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 FBXW12Q6X9E4 464 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 LINC00596Q86U02 117 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 LURAP1LQ8IV03 231 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 FAM219AQ8IW50 185 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 AGBL5Q8NDL9 886 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 HPSE2Q8WWQ2 592 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 PIGTQ969N2 578 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 RELTQ969Z4 430 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 HIST1H2BAQ96A08 127 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 FBXO17Q96EF6 278 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 GNPNAT1Q96EK6 184 aaPredicted RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 REEP6Q96HR9 211 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 TMEM56Q96MV1 263 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 FAAP24Q9BTP7 215 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 ADAT1Q9BUB4 502 aaKnown RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 RBM24Q9BX46 236 aaKnown RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 PRDM14Q9GZV8 571 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 SLC35B3Q9H1N7 401 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 TMEM231Q9H6L2 316 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 SEBOXQ9HB31 216 aaPredicted RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 ELL3Q9HB65 397 aaPredicted RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 PROK2Q9HC23 129 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 SLC2A9Q9NRM0 540 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 C19orf12Q9NSK7 152 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 TMEM38BQ9NVV0 291 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 ATXN7L1Q9ULK2 861 aaPredicted RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 FAM96BQ9Y3D0 163 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 LSM5Q9Y4Y9 91 aaKnown RBP5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 TMEM56-RWDD3S4R434 201 aa5.31□□□□□ -1.56
UBQLN4-202ENST00000459954 COL27A1Q8IZC6 1860 aaPredicted RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 CEP295Q9C0D2 2601 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 TRBV6-6A0A0A6YYG2 114 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 LY6G6EA0A0G2JKS1 128 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 A0A0J9YW62 118 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 ZNF816-ZNF321PA0A0X1KG74 233 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 C7orf77A4D0Y5 90 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 LRP5LA4QPB2 252 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 CXorf65A6NEN9 183 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 A6NJY4 79 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 ZNF732B4DXR9 585 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 B4E171 279 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 TRDCB7Z8K6 153 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 RPL36A-HNRNPH2H7BZ11 118 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 K7N7A8 449 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 MASP2O00187 686 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 MSTNO14793 375 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 MT-CO3P00414 261 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 IGHV2-5P01817 119 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 S100A6P06703 90 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 KLK3P07288 261 aaPredicted RBP5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 OR5AC1P0C628 307 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 OR8U9P0C7N5 309 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 ANOS1P23352 680 aa5.3□□□□□ -1.56
UBQLN4-202ENST00000459954 ACKR3P25106 362 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms