RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 NCR3LG1Q68D85 454 aa17■□□□□ 0.31
VARS-218ENST00000459667 C17orf107Q6ZR85 190 aa17■□□□□ 0.31
VARS-218ENST00000459667 OR52N4Q8NGI2 321 aa17■□□□□ 0.31
VARS-218ENST00000459667 OR5D13Q8NGL4 314 aa17■□□□□ 0.31
VARS-218ENST00000459667 TNFRSF14Q92956 283 aa17■□□□□ 0.31
VARS-218ENST00000459667 ORAI1Q96D31 301 aa17■□□□□ 0.31
VARS-218ENST00000459667 EXOSC4Q9NPD3 245 aaKnown RBP17■□□□□ 0.31
VARS-218ENST00000459667 NOX4Q9NPH5 578 aa17■□□□□ 0.31
VARS-218ENST00000459667 A0A0U1RQK1 487 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 CLDN34H7C241 214 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 SIRPB1O00241 398 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 PIP4P2Q8N4L2 257 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 MS4A15Q8N5U1 240 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 TNFAIP8L1Q8WVP5 186 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 UFD1Q92890 307 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 SLC25A28Q96A46 364 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 OR14A2Q96R54 314 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 OR5M11Q96RB7 305 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 CHST6Q9GZX3 395 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 TMEM138Q9NPI0 162 aa16.99■□□□□ 0.31
VARS-218ENST00000459667 LSM2Q9Y333 95 aaKnown RBP16.99■□□□□ 0.31
VARS-218ENST00000459667 A0A1W2PRD5 423 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 A0A1W2PRF3 423 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 A0A1W2PRM7 423 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 SH2D1BO14796 132 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 HOXA3O43365 443 aaPredicted RBP16.98■□□□□ 0.31
VARS-218ENST00000459667 PSPNO60542 156 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 OR2H2O95918 312 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 ALDOBP05062 364 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 RNASE1P07998 156 aaKnown RBP16.98■□□□□ 0.31
VARS-218ENST00000459667 CCL3L1P16619 93 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 BDKRB2P30411 391 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 GABARAPL2P60520 117 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 EDDM3AQ14507 147 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 GRK1Q15835 563 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 DDI2Q5TDH0 399 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 Q6YL49 198 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 PXT1Q8NFP0 134 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 PPP1R35Q8TAP8 253 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 FAM192AQ9GZU8 254 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 STAB1Q9NY15 2570 aa16.98■□□□□ 0.31
VARS-218ENST00000459667 hCG_1809904A0A1W2PP81 198 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 A0A1W2PPE2 198 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 A0A1W2PR64 198 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 A0A1W2PRV1 198 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 NPFFO15130 113 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 MRPS14O60783 128 aaKnown RBP16.97■□□□□ 0.31
VARS-218ENST00000459667 HSMCR30P0CW71 290 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 IGFBP3P17936 291 aaPredicted RBP16.97■□□□□ 0.31
VARS-218ENST00000459667 MTNR1BP49286 362 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 UBE2E1P51965 193 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 GPR50Q13585 617 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 OR4S1Q8NGB4 309 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 GCDHQ92947 438 aaPredicted RBP16.97■□□□□ 0.31
VARS-218ENST00000459667 NKX3-1Q99801 234 aaPredicted RBP16.97■□□□□ 0.31
VARS-218ENST00000459667 YTHDF1Q9BYJ9 559 aaKnown RBP16.97■□□□□ 0.31
VARS-218ENST00000459667 ISYNA1Q9NPH2 558 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 DSCAML1Q8TD84 2053 aa16.97■□□□□ 0.31
VARS-218ENST00000459667 TRBV5-7A0A0A0MS05 114 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 MEX3AA1L020 520 aaKnown RBP16.96■□□□□ 0.31
VARS-218ENST00000459667 TMEM89A2RUT3 159 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 MGST3O14880 152 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 MELTFP08582 738 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 ZNF44P15621 663 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 FSTP19883 344 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 ZNF93P35789 620 aaPredicted RBP16.96■□□□□ 0.31
VARS-218ENST00000459667 OR3A1P47881 315 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 OR3A4PP47883 348 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 BMXP51813 675 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 SCN1BQ07699 218 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 RSU1Q15404 277 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 TBCEQ15813 527 aaPredicted RBP16.96■□□□□ 0.31
VARS-218ENST00000459667 ELP2Q6IA86 826 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 PNKDQ8N490 385 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 C11orf42Q8N5U0 333 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 TPRX1Q8N7U7 411 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 FOXJ3Q9UPW0 622 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 FAM96BQ9Y3D0 163 aa16.96■□□□□ 0.31
VARS-218ENST00000459667 TRAV8-7A0A075B6U6 113 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 A0A1W2PPK0 400 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 GPX5O75715 221 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 SAA4P35542 130 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 TGFBR2P37173 567 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 DLX6P56179 175 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 MEF2CQ06413 473 aaPredicted RBP16.95■□□□□ 0.3
VARS-218ENST00000459667 MLLT11Q13015 90 aaPredicted RBP16.95■□□□□ 0.3
VARS-218ENST00000459667 HCP5Q6MZN7 132 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 C12orf54Q6X4T0 127 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 SVOPQ8N4V2 548 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 OR10K1Q8NGX5 313 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 DERL3Q96Q80 235 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 TMED9Q9BVK6 235 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 TNFRSF19Q9NS68 423 aa16.95■□□□□ 0.3
VARS-218ENST00000459667 SF3B6Q9Y3B4 125 aaKnown RBP16.95■□□□□ 0.3
VARS-218ENST00000459667 hADV38S2A0JD32 116 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 MEIOCA2RUB1 952 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 MAGEA13PA6NCF6 341 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 C17orf98A8MV24 154 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 FBP1P09467 338 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 ZNF728P0DKX0 622 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms