RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 MKXQ8IYA7 352 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 LRTM2Q8N967 370 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 SPAARA0A1B0GVQ0 90 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 MSGN1A6NI15 193 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 ZNF732B4DXR9 585 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 FTH1P19P0C7X4 201 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 WNT5AP41221 380 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 GLP1RP43220 463 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 TMEM187Q14656 261 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 IAH1Q2TAA2 248 aaPredicted RBP14.31□□□□□ -0.12
CCDC43-202ENST00000457422 ABCA11PQ4W5N1 156 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 BAP18Q8IXM2 172 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 SLC38A6Q8IZM9 456 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 RTN4IP1Q8WWV3 396 aaPredicted RBP14.31□□□□□ -0.12
CCDC43-202ENST00000457422 EXTL1Q92935 676 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 CNTNAP3BQ96NU0 1288 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 SUCNR1Q9BXA5 334 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 CNTNAP3Q9BZ76 1288 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 PLSCR2Q9NRY7 297 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 MTCH1Q9NZJ7 389 aa14.31□□□□□ -0.12
CCDC43-202ENST00000457422 NKX2-8O15522 239 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 FGF16O43320 207 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 IFNA21P01568 189 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 FXYD4P59646 89 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 TUSC1Q2TAM9 212 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 GGNBP1Q5YKI7 109 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 TFAP2EQ6VUC0 442 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 OR5P3Q8WZ94 311 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 GMPPAQ96IJ6 420 aaPredicted RBP14.3□□□□□ -0.12
CCDC43-202ENST00000457422 HS3ST6Q96QI5 342 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 HIST1H2AAQ96QV6 131 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 RSRP1Q9BUV0 290 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 SLC2A9Q9NRM0 540 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 GSKIPQ9P0R6 139 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 MPC1Q9Y5U8 109 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 SHANK1Q9Y566 2161 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 NAPSAO96009 420 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 MDP1Q86V88 176 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 OR5L1Q8NGL2 311 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 SLC5A7Q9GZV3 580 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 OR51B6Q9H340 312 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 FAM86C1Q9NVL1 165 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 MED12LQ86YW9 2145 aa14.3□□□□□ -0.12
CCDC43-202ENST00000457422 OR5B21A6NL26 309 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 TRAPPC2LH3BP13 241 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 J3QW42 95 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 OR5AC1P0C628 307 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 S100A10P60903 97 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 LINC00596Q86U02 117 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 MRPL24Q96A35 216 aaKnown RBP14.29□□□□□ -0.12
CCDC43-202ENST00000457422 SYT3Q9BQG1 590 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 PLK3Q9H4B4 646 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 TMEM100Q9NV29 134 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 IL36RNQ9UBH0 155 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 FAM186AA6NE01 2351 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 DOCK7Q96N67 2140 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 ANKRD30BLA7E2S9 258 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 LGALS8O00214 317 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 LILRA1O75019 489 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 IGHG3P01860 377 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 GALNT11Q8NCW6 608 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 Q9N2K0 584 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 GLRX2Q9NS18 164 aa14.29□□□□□ -0.12
CCDC43-202ENST00000457422 TAAR5O14804 337 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 DEDDO75618 318 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 PPYP01298 95 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 AADACP22760 399 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 HERV-K104P61576 105 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 LIAT1Q6ZQX7 453 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 ZNF573Q86YE8 665 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 CCDC71LQ8N9Z2 235 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 C17orf50Q8WW18 174 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 GTF3AQ92664 365 aaKnown RBP14.28□□□□□ -0.12
CCDC43-202ENST00000457422 ASCL3Q9NQ33 180 aa14.28□□□□□ -0.12
CCDC43-202ENST00000457422 SYNGR1O43759 233 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 HKR1P10072 659 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 SPINK2P20155 84 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 CCL11P51671 97 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 GNG3P63215 75 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 PHLDA2Q53GA4 152 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 ZNF585AQ6P3V2 769 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 IGFL2Q6UWQ7 119 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 P4HA3Q7Z4N8 544 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 MSI2Q96DH6 328 aaKnown RBP14.27□□□□□ -0.12
CCDC43-202ENST00000457422 C18orf12Q96KH6 178 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 PIGMQ9H3S5 423 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 TAS2R3Q9NYW6 316 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 CLCF1Q9UBD9 225 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 OTOGLQ3ZCN5 2332 aa14.27□□□□□ -0.12
CCDC43-202ENST00000457422 HOXD4P09016 255 aaPredicted RBP14.27□□□□□ -0.13
CCDC43-202ENST00000457422 IL24Q13007 206 aa14.27□□□□□ -0.13
CCDC43-202ENST00000457422 SMCO1Q147U7 214 aa14.27□□□□□ -0.13
CCDC43-202ENST00000457422 SP6Q3SY56 376 aa14.27□□□□□ -0.13
CCDC43-202ENST00000457422 FAM185AQ8N0U4 392 aa14.27□□□□□ -0.13
CCDC43-202ENST00000457422 FDCSPQ8NFU4 85 aa14.27□□□□□ -0.13
CCDC43-202ENST00000457422 RNF141Q8WVD5 230 aa14.27□□□□□ -0.13
CCDC43-202ENST00000457422 PKIBQ9C010 78 aa14.27□□□□□ -0.13
CCDC43-202ENST00000457422 SPACA1Q9HBV2 294 aa14.27□□□□□ -0.13
CCDC43-202ENST00000457422 H7C1Q1 480 aa14.26□□□□□ -0.13
CCDC43-202ENST00000457422 WT1P19544 449 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms