RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SPCS2Q15005 226 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 TRAM1Q15629 374 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 TIMM50Q3ZCQ8 353 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 C9orf135Q5VTT2 229 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 METTL11BQ5VVY1 283 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 THOC7Q6I9Y2 204 aaKnown RBP4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 FAM122CQ6P4D5 195 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 UNQ9370/PRO34162Q6UXP9 181 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 TFAP2EQ6VUC0 442 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 C3P1Q6ZMU1 363 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 TMEM91Q6ZNR0 172 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 FAM220AQ7Z4H9 259 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 ABHD12BQ7Z5M8 362 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 CATSPERDQ86XM0 798 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 CCDC36Q8IYA8 594 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 RPRMLQ8N4K4 120 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 MS4A15Q8N5U1 240 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 CNEP1R1Q8N9A8 125 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR6K3Q8NGY3 331 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 HSD17B8Q92506 261 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 HAVCR1Q96D42 359 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 SMIM19Q96E16 107 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 WBP1Q96G27 269 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 COQ2Q96H96 371 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 PGLYRP3Q96LB9 341 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 C4orf45Q96LM5 186 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 SGK494Q96LW2 274 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZFP3Q96NJ6 502 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 WWC2-AS2Q96NR7 200 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 WACQ9BTA9 647 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 TMED9Q9BVK6 235 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 RNF167Q9H6Y7 350 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 NIPAL2Q9H841 368 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 TXNL4BQ9NX01 149 aaKnown RBP4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 FBXL3Q9UKT7 428 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 STUB1Q9UNE7 303 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 SSR3Q9UNL2 185 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 POLR1DQ9Y2S0 133 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 TIMM10BQ9Y5J6 103 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 ABCA4P78363 2273 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 SMG1Q96Q15 3661 aaKnown RBP4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 USP9XQ93008 2570 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 FAM208BQ5VWN6 2430 aa4.4□□□□□ -1.71
HMGB1P4-201ENST00000455362 LRRK2Q5S007 2527 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 TMEM269A0A1B0GVZ9 245 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR6C6A6NF89 314 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 HSBP1L1C9JCN9 74 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF878C9JN71 531 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 CCL24O00175 119 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 GABRPO00591 440 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 SGCEO43556 437 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 SYNGR3O43761 229 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 SC5DO75845 299 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 FARS2O95363 451 aaKnown RBP4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 HLA-HP01893 362 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 APOHP02749 345 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 GSTT2P0CG29 244 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 GSTT2BP0CG30 244 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF32P17041 273 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 GNLYP22749 145 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 IGHV1-2P23083 117 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 OTX1P32242 354 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 TGFBR1P36897 503 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 PSMD7P51665 324 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 PRKXP51817 358 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 GRB2P62993 217 aaKnown RBP4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 TUBA1BP68363 451 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 PSG4Q00888 419 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 TGFBR3Q03167 851 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 MFGE8Q08431 387 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 SCRN3Q0VDG4 424 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 ECH1Q13011 328 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 INSL4Q14641 139 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 RAB35Q15286 201 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 TAF13Q15543 124 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 KRTAP27-1Q3LI81 207 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 Q3ZCU0 254 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 ACSM3Q53FZ2 586 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 WDR38Q5JTN6 314 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 SUMO4Q6EEV6 95 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 C22orf42Q6IC83 251 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR7E24Q6IFN5 339 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF774Q6NX45 483 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF544Q6NX49 715 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 TMEM53Q6P2H8 277 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 Q6ZT83 130 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 TUBA1AQ71U36 451 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 SLC16A14Q7RTX9 510 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 COX8CQ7Z4L0 72 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 CEACAM19Q7Z692 300 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 TGIF2LXQ8IUE1 241 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 RDH10Q8IZV5 341 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 GABRG1Q8N1C3 465 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 KLHDC1Q8N7A1 406 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF433Q8N7K0 673 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF676Q8N7Q3 588 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR1K1Q8NGR3 316 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR5AK2Q8NH90 309 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR1F12Q8NHA8 337 aa4.39□□□□□ -1.71
HMGB1P4-201ENST00000455362 IL17DQ8TAD2 202 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms