RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TMEM106BQ9NUM4 274 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 RNF7Q9UBF6 113 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 MRPS7Q9Y2R9 242 aaKnown RBP9.2□□□□□ -0.94
SCN9A-205ENST00000454569 POLDIP2Q9Y2S7 368 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 CSMD1Q96PZ7 3565 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 YLPM1P49750 1951 aaKnown RBP9.2□□□□□ -0.94
SCN9A-205ENST00000454569 IGKV1D-17A0A075B6S4 117 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 ISPDA4D126 451 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 H7C417 338 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 ZNF780AO75290 641 aaPredicted RBP9.2□□□□□ -0.94
SCN9A-205ENST00000454569 FCN3O75636 299 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 RP2O75695 350 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 CYB5AP00167 134 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 IL7P13232 177 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 GNB3P16520 340 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 TNFRSF1AP19438 455 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 BLVRBP30043 206 aaPredicted RBP9.2□□□□□ -0.94
SCN9A-205ENST00000454569 NR4A2P43354 598 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 RANBP1P43487 201 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 DEFA1P59665 94 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 DEFA3P59666 94 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 ZNF260Q3ZCT1 412 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 RNASE12Q5GAN4 147 aaKnown RBP9.2□□□□□ -0.94
SCN9A-205ENST00000454569 PYHIN1Q6K0P9 492 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 C6orf201Q7Z4U5 140 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 Q8N402 240 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 FGFRL1Q8N441 504 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 OR10R2Q8NGX6 335 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 RAB40AQ8WXH6 277 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 S100A16Q96FQ6 103 aaKnown RBP9.2□□□□□ -0.94
SCN9A-205ENST00000454569 EGLN1Q9GZT9 426 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 OR14J1Q9UGF5 321 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 TRAV24A0A0B4J272 114 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 RFPL4AA6NLU0 287 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 RFPL4AL1F8VTS6 287 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 XRCC3O43542 346 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 LANCL1O43813 399 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 IGHV4-39P01824 125 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 PSG2P11465 335 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 SELLP14151 372 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 CHATP28329 748 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 PITPNAQ00169 270 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 GPR176Q14439 515 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 BAK1Q16611 211 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 CDNFQ49AH0 187 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 NHLRC3Q5JS37 347 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 TRIQKQ629K1 86 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 LYPD2Q6UXB3 125 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 C20orf204Q6ZNR8 217 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 Q6ZPA2 131 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 DCDC5Q6ZRR9 648 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 C5orf24Q7Z6I8 188 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 FAM90A1Q86YD7 464 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 BPIFB2Q8N4F0 458 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 CHST4Q8NCG5 386 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 PHF21AQ96BD5 680 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 CCL19Q99731 98 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 SULT4A1Q9BR01 284 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 HDHD3Q9BSH5 251 aaPredicted RBP9.19□□□□□ -0.94
SCN9A-205ENST00000454569 FAAP24Q9BTP7 215 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 PECRQ9BY49 303 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 RAB1BQ9H0U4 201 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 RABL2AQ9UBK7 228 aaPredicted RBP9.19□□□□□ -0.94
SCN9A-205ENST00000454569 RABL2BQ9UNT1 228 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 PLEKHA6Q9Y2H5 1048 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 UNC79Q9P2D8 2635 aa9.19□□□□□ -0.94
SCN9A-205ENST00000454569 ABCA2Q9BZC7 2435 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 MEIS3P1A6NDR6 274 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 TMEM235A6NFC5 223 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 SIRPB1O00241 398 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 HSPB6O14558 160 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 TNFRSF13BO14836 293 aaPredicted RBP9.18□□□□□ -0.94
SCN9A-205ENST00000454569 PSPNO60542 156 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 OR7C1O76099 320 aaPredicted RBP9.18□□□□□ -0.94
SCN9A-205ENST00000454569 OR2H2O95918 312 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 FCER2P06734 321 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 CSF3P09919 207 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 DAOP14920 347 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 DGCR2P98153 550 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 ZNF146Q15072 292 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 ZMYND11Q15326 602 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 TRIM16LQ309B1 348 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 NKAPLQ5M9Q1 402 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 TMEM69Q5SWH9 247 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 Q6ZTK2 550 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 RDH5Q92781 318 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 ERGIC1Q969X5 290 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 MRPS24Q96EL2 167 aaKnown RBP9.18□□□□□ -0.94
SCN9A-205ENST00000454569 URM1Q9BTM9 101 aaKnown RBP9.18□□□□□ -0.94
SCN9A-205ENST00000454569 RSRP1Q9BUV0 290 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 AUNIPQ9H7T9 357 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 TMEM165Q9HC07 324 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 NLKQ9UBE8 527 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 ZNF222Q9UK12 451 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 WIPI2Q9Y4P8 454 aa9.18□□□□□ -0.94
SCN9A-205ENST00000454569 A0A1W2PQ09 198 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 TMEM82A0PJX8 343 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 UBE2QL1A1L167 161 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 METTL21EPA6NDL7 271 aa9.17□□□□□ -0.94
SCN9A-205ENST00000454569 OR2AT4A6NND4 320 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms