RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 MRPL33O75394 65 aaKnown RBP10.47□□□□□ -0.73
COL27A1-202ENST00000451716 CD8AP01732 235 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 SNRPCP09234 159 aaKnown RBP10.47□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF44P15621 663 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 RPA2P15927 270 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 TBPP20226 339 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 GLRA1P23415 457 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 GUCA2BQ16661 112 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 PNLIPRP3Q17RR3 467 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 TUSC5Q8IXB3 177 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 SVBPQ8N300 66 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 FNDC9Q8TBE3 224 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 FAM173AQ9BQD7 235 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 FAAP24Q9BTP7 215 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 COMMD9Q9P000 198 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 ANAPC10Q9UM13 185 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 ADAP1O75689 374 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 TNFSF15O95150 251 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 OR8U8P0C7N1 319 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 MPGP29372 298 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 ALDH3B1P43353 468 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 LHX2P50458 406 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 RRADP55042 308 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 RBX1P62877 108 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 MRPS11P82912 194 aaKnown RBP10.47□□□□□ -0.73
COL27A1-202ENST00000451716 PLA2G2CQ5R387 149 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 VAX1Q5SQQ9 334 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 TTTY12Q9BZ98 90 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 TREM1Q9NP99 234 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 GPR132Q9UNW8 380 aa10.47□□□□□ -0.73
COL27A1-202ENST00000451716 FAM221AA4D161 298 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 TSTD3H0UI37 97 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 MSTNO14793 375 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 DLEU1O43261 78 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 NXPH2O95156 264 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 DUS4LO95620 317 aaKnown RBP10.46□□□□□ -0.73
COL27A1-202ENST00000451716 SERPINA5P05154 406 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 CPT2P23786 658 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 SERPINF1P36955 418 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 RSU1Q15404 277 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 HES3Q5TGS1 186 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 AADACL3Q5VUY0 350 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 DMRTA1Q5VZB9 504 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 C11orf87Q6NUJ2 197 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 Q6ZSR3 168 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 SLC24A4Q8NFF2 622 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 SCARB1Q8WTV0 552 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 PIGCQ92535 297 aa10.46□□□□□ -0.73
COL27A1-202ENST00000451716 DHRS7CA6NNS2 312 aa10.46□□□□□ -0.74
COL27A1-202ENST00000451716 NRASP01111 189 aa10.46□□□□□ -0.74
COL27A1-202ENST00000451716 HLA-HP01893 362 aa10.46□□□□□ -0.74
COL27A1-202ENST00000451716 CRYABP02511 175 aaKnown RBP10.46□□□□□ -0.74
COL27A1-202ENST00000451716 CSTBP04080 98 aaKnown RBP10.46□□□□□ -0.74
COL27A1-202ENST00000451716 SPINK2P20155 84 aa10.46□□□□□ -0.74
COL27A1-202ENST00000451716 ARF1P84077 181 aaKnown RBP10.46□□□□□ -0.74
COL27A1-202ENST00000451716 PIGYQ3MUY2 71 aa10.46□□□□□ -0.74
COL27A1-202ENST00000451716 CHRFAM7AQ494W8 412 aa10.46□□□□□ -0.74
COL27A1-202ENST00000451716 CLEC18BQ6UXF7 455 aa10.46□□□□□ -0.74
COL27A1-202ENST00000451716 BORCS8Q96FH0 119 aa10.46□□□□□ -0.74
COL27A1-202ENST00000451716 RTBDNQ9BSG5 229 aaPredicted RBP10.46□□□□□ -0.74
COL27A1-202ENST00000451716 TAS2R3Q9NYW6 316 aa10.46□□□□□ -0.74
COL27A1-202ENST00000451716 IGKV1-12A0A0C4DH73 117 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 KNG1P01042 644 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 IGKV1D-12P01611 117 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 LINC00614P0C842 121 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 OPRM1P35372 400 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 CLDN18P56856 261 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 SUPT4H1P63272 117 aaKnown RBP10.45□□□□□ -0.74
COL27A1-202ENST00000451716 FAM3AP98173 230 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 PLGLB1Q02325 96 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 TGIF1Q15583 401 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 TMEM128Q5BJH2 165 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 TMEM251Q8N6I4 163 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 BHLHE23Q8NDY6 225 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 WNT2BQ93097 391 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 R3HDM4Q96D70 268 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 Q96M66 194 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 ZNF75AQ96N20 296 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 TMEM208Q9BTX3 173 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 TM2D1Q9BX74 207 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 RIF1Q5UIP0 2472 aaKnown RBP10.45□□□□□ -0.74
COL27A1-202ENST00000451716 DSPP15924 2871 aaKnown RBP10.45□□□□□ -0.74
COL27A1-202ENST00000451716 RNF222A6NCQ9 220 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 ZNF503-AS2A6NEH8 195 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 FIGNL2A6NMB9 653 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 MMP7P09237 267 aaPredicted RBP10.45□□□□□ -0.74
COL27A1-202ENST00000451716 PKIAP61925 76 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 RIPPLY2Q5TAB7 128 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 LPCAT3Q6P1A2 487 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 RSRP1Q9BUV0 290 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 GPR87Q9BY21 358 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 TNFSF18Q9UNG2 199 aa10.45□□□□□ -0.74
COL27A1-202ENST00000451716 GEMIN2O14893 280 aaKnown RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 PPIHO43447 177 aaKnown RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 SFTPBP07988 381 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 LUMP51884 338 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 SURF2Q15527 256 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 ANKRD55Q3KP44 614 aa10.44□□□□□ -0.74
COL27A1-202ENST00000451716 FAHD2BQ6P2I3 314 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-202ENST00000451716 MOB3CQ70IA8 216 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms