RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MEOX2P50222 304 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 TAS2R46P59540 309 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 SRSF3P84103 164 aaKnown RBP12.74□□□□□ -0.37
SF1-211ENST00000448404 KRTAP27-1Q3LI81 207 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 RIPPLY2Q5TAB7 128 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 TMEM42Q69YG0 159 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 TMEM185AQ8NFB2 350 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 PXT1Q8NFP0 134 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
SF1-211ENST00000448404 ANKRD11Q6UB99 2663 aaPredicted RBP12.73□□□□□ -0.37
SF1-211ENST00000448404 TNRC6AQ8NDV7 1962 aaKnown RBP12.73□□□□□ -0.37
SF1-211ENST00000448404 BSNQ9UPA5 3926 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 TRAV20A0A0B4J274 112 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 ZNF816-ZNF321PA0A0X1KG74 233 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 XRCC2O43543 280 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 OR5AC1P0C628 307 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 AGTR1P30556 359 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 CALCRP30988 508 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 ID4P47928 161 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 RBM39Q14498 530 aaKnown RBP12.73□□□□□ -0.37
SF1-211ENST00000448404 OR2T2Q6IF00 324 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 ALKBH2Q6NS38 261 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 OR1S2Q8NGQ3 325 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 SLC7A11Q9UPY5 501 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 LSM5Q9Y4Y9 91 aaKnown RBP12.73□□□□□ -0.37
SF1-211ENST00000448404 ZNF732B4DXR9 585 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 GPR31O00270 319 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 WNT5AP41221 380 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 OR8B8Q15620 311 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 IAH1Q2TAA2 248 aaPredicted RBP12.73□□□□□ -0.37
SF1-211ENST00000448404 Q6ZSR3 168 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 LYZL2Q7Z4W2 148 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 MCEMP1Q8IX19 187 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 EIF4E3Q8N5X7 224 aaKnown RBP12.73□□□□□ -0.37
SF1-211ENST00000448404 C1QTNF5Q9BXJ0 243 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 GPR87Q9BY21 358 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 MTCH1Q9NZJ7 389 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 GHRLQ9UBU3 117 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 C14orf166Q9Y224 244 aaKnown RBP12.73□□□□□ -0.37
SF1-211ENST00000448404 KALRNO60229 2985 aa12.73□□□□□ -0.37
SF1-211ENST00000448404 A0A0D9SG52 128 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 IL18BPO95998 194 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 SLC25A4P12235 298 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 RAB13P51153 203 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 AIMP2Q13155 320 aaKnown RBP12.72□□□□□ -0.37
SF1-211ENST00000448404 ALKBH6Q3KRA9 238 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 LPCAT3Q6P1A2 487 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 HAGHLQ6PII5 290 aaPredicted RBP12.72□□□□□ -0.37
SF1-211ENST00000448404 MRPL21Q7Z2W9 205 aaKnown RBP12.72□□□□□ -0.37
SF1-211ENST00000448404 RASL12Q9NYN1 266 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 PCNX1Q96RV3 2341 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 HS3ST1O14792 307 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 RHBDL1O75783 438 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 TFF1P04155 84 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 HLA-GP17693 338 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 PCBD1P61457 104 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 SRSF4Q08170 494 aaKnown RBP12.72□□□□□ -0.37
SF1-211ENST00000448404 CLN3Q13286 438 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 MEX3BQ6ZN04 569 aaKnown RBP12.72□□□□□ -0.37
SF1-211ENST00000448404 LHFPL2Q6ZUX7 228 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 CBLN2Q8IUK8 224 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 ZFP82Q8N141 532 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 NEK7Q8TDX7 302 aa12.72□□□□□ -0.37
SF1-211ENST00000448404 C21orf140B9A014 251 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 LYZL6O75951 148 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 OR2F2O95006 317 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 FUT6P51993 359 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 RBM11P57052 281 aaKnown RBP12.71□□□□□ -0.37
SF1-211ENST00000448404 TAS2R31P59538 309 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 OR2F1Q13607 317 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 SLC10A1Q14973 349 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 FAHD2BQ6P2I3 314 aaPredicted RBP12.71□□□□□ -0.37
SF1-211ENST00000448404 ZNF585AQ6P3V2 769 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 RDH5Q92781 318 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 FAHD2AQ96GK7 314 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 BARX1Q9HBU1 254 aaPredicted RBP12.71□□□□□ -0.37
SF1-211ENST00000448404 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 EDARQ9UNE0 448 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 ACACAQ13085 2346 aa12.71□□□□□ -0.37
SF1-211ENST00000448404 IGKV3D-15A0A087WSY6 115 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 F12P00748 615 aaPredicted RBP12.71□□□□□ -0.38
SF1-211ENST00000448404 SCTP09683 121 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 CA6P23280 308 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 KCNJ3P48549 501 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 S100A12P80511 92 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 SNTB1Q13884 538 aaKnown RBP12.71□□□□□ -0.38
SF1-211ENST00000448404 ACTBL2Q562R1 376 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 C20orf204Q6ZNR8 217 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 MDS2Q8NDY4 140 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 FAM86C1Q9NVL1 165 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 ABI3Q9P2A4 366 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 PCDHB10Q9UN67 800 aa12.71□□□□□ -0.38
SF1-211ENST00000448404 TNFSF12O43508 249 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 FBXO24O75426 580 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 IFNA2P01563 188 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 AADACP22760 399 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 HFEQ30201 348 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 GGNBP1Q5YKI7 109 aa12.7□□□□□ -0.38
SF1-211ENST00000448404 RPL7L1Q6DKI1 246 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms