RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 ZNF701M0R085 212 aaPredicted RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 DEGS1O15121 323 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 LDLRAD4O15165 306 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 TMPRSS2O15393 492 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 ADAM20O43506 726 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 NOL3O60936 208 aaKnown RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 TMEM127O75204 238 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 FBXO24O75426 580 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 CRTAPO75718 401 aaPredicted RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 HAND1O96004 215 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 IGHV2-5P01817 119 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 CHRM2P08172 466 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 MGMTP16455 207 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 LMO1P25800 156 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 IL2RGP31785 369 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 CEBPDP49716 269 aaPredicted RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 RORCP51449 518 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 SNU13P55769 128 aaKnown RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 RBM11P57052 281 aaKnown RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 SCN1BQ07699 218 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 UNC119Q13432 240 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 PDCD1Q15116 288 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 PIGYQ3MUY2 71 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 OR10K2Q6IF99 312 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 Q6P435 159 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 SPNS3Q6ZMD2 512 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF841Q6ZN19 808 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 SLC36A1Q7Z2H8 476 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 OR2W3Q7Z3T1 314 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 CIARTQ8N365 385 aaPredicted RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF561Q8N587 486 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNRF1Q8ND25 227 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 WFDC12Q8WWY7 111 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 FAM46BQ96A09 425 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 GAFA1Q96PS6 74 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 BARHL1Q9BZE3 327 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 SELENOIQ9C0D9 397 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 CST11Q9H112 138 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF665Q9H7R5 613 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 OR14J1Q9UGF5 321 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 OR5V1Q9UGF6 321 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 RSL24D1Q9UHA3 163 aaKnown RBP6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 RAB22AQ9UL26 194 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 MAB21L2Q9Y586 359 aa6.28□□□□□ -1.4
AC004540.1-206ENST00000448056 TANC2Q9HCD6 1990 aa6.27□□□□□ -1.4
AC004540.1-206ENST00000448056 ITPR3Q14573 2671 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 CREBBPQ92793 2442 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 TMEM272A0A1B0GTI8 110 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 A0A1B0GW55 424 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 TMEM82A0PJX8 343 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 NKX6-3A6NJ46 265 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 H7C1Q1 480 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 K7N7A8 449 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 DVL1O14640 695 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 GEMIN2O14893 280 aaKnown RBP6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 SIGLEC5O15389 551 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 NDUFB3O43676 98 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 FCN3O75636 299 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 MPIG6BO95866 241 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 OR2H2O95918 312 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 PAHP00439 452 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 HEXAP06865 529 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 DUX4L2P0CJ85 424 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 DUX4L3P0CJ86 424 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 DUX4L4P0CJ87 422 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 DUX4L5P0CJ88 424 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 DUX4L6P0CJ89 424 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 DUX4L7P0CJ90 424 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 RPS2P15880 293 aaKnown RBP6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 ZNF182P17025 639 aaPredicted RBP6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 RPS27AP62979 156 aaKnown RBP6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 IL13RA1P78552 427 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 COL10A1Q03692 680 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 PLA2G7Q13093 441 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 IKZF1Q13422 519 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 IL13RA2Q14627 380 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 TAF9Q16594 264 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 DUX4L9Q6RFH8 374 aaPredicted RBP6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 METAP1DQ6UB28 335 aaPredicted RBP6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 C17orf107Q6ZR85 190 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 NLRC3Q7RTR2 1065 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 LINC00596Q86U02 117 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 FAM89BQ8N5H3 189 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 FAM216BQ8N7L0 139 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 CHST4Q8NCG5 386 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 MAPK1IP1LQ8NDC0 245 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 OR8B3Q8NGG8 313 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 DYNC2LI1Q8TCX1 351 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 PTX4Q96A99 478 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 RAB39BQ96DA2 213 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 NEIL1Q96FI4 390 aaPredicted RBP6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 C1orf159Q96HA4 380 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 Q96M66 194 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 OR8B2Q96RD0 313 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 MRI1Q9BV20 369 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 TM2D1Q9BX74 207 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 TMEM59Q9BXS4 323 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 TMPRSS13Q9BYE2 586 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 SHARPINQ9H0F6 387 aa6.27□□□□□ -1.41
AC004540.1-206ENST00000448056 KCNK15Q9H427 330 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms