RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ID2Q02363 134 aa16.77■□□□□ 0.27
HMGA1-205ENST00000447654 FIGLAQ6QHK4 219 aa16.77■□□□□ 0.27
HMGA1-205ENST00000447654 FAM3CQ92520 227 aa16.77■□□□□ 0.27
HMGA1-205ENST00000447654 MS4A10Q96PG2 267 aa16.77■□□□□ 0.27
HMGA1-205ENST00000447654 DAPP1Q9UN19 280 aa16.77■□□□□ 0.27
HMGA1-205ENST00000447654 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.76■□□□□ 0.27
HMGA1-205ENST00000447654 TOMM40O96008 361 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 ZNF41P51814 821 aaPredicted RBP16.76■□□□□ 0.27
HMGA1-205ENST00000447654 MGAT2Q10469 447 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 KIR2DS3Q14952 304 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 WBP2NLQ6ICG8 309 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 OR8G2PQ6IF36 304 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 ETFRF1Q6IPR1 90 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 TMEM52Q8NDY8 209 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 CORO2AQ92828 525 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 CTHRC1Q96CG8 243 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 NICN1Q9BSH3 213 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 ABHD14AQ9BUJ0 271 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 ELL3Q9HB65 397 aaPredicted RBP16.76■□□□□ 0.27
HMGA1-205ENST00000447654 DMDP11532 3685 aa16.76■□□□□ 0.27
HMGA1-205ENST00000447654 MAP1LC3B2A6NCE7 125 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 B3GALT2O43825 422 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 CT45A8P0DMV1 189 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 CT45A9P0DMV2 189 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 BCL2P10415 239 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 EPHA8P29322 1005 aaPredicted RBP16.75■□□□□ 0.27
HMGA1-205ENST00000447654 ARFRP1Q13795 201 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 ACSF3Q4G176 576 aaPredicted RBP16.75■□□□□ 0.27
HMGA1-205ENST00000447654 CT45A2Q5DJT8 189 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 OR2C3Q8N628 320 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 OR5D14Q8NGL3 314 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 OIT3Q8WWZ8 545 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 MAP1LC3BQ9GZQ8 125 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 LYRM4Q9HD34 91 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 NAT8Q9UHE5 227 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 EMC9Q9Y3B6 208 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 CLEC18AA5D8T8 446 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 YPEL1O60688 119 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 SYNGR4O95473 234 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 ZNF10P21506 573 aaPredicted RBP16.75■□□□□ 0.27
HMGA1-205ENST00000447654 TMEM50BP56557 158 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 C1orf61Q13536 156 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 TMEM187Q14656 261 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 ATG4DQ86TL0 474 aaPredicted RBP16.75■□□□□ 0.27
HMGA1-205ENST00000447654 CLEC18CQ8NCF0 446 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 ZNF845Q96IR2 970 aaPredicted RBP16.75■□□□□ 0.27
HMGA1-205ENST00000447654 ABHD14BQ96IU4 210 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 YPEL2Q96QA6 119 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 C11orf1Q9H5F2 150 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 STARD5Q9NSY2 213 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 LYRM2Q9NU23 88 aaPredicted RBP16.75■□□□□ 0.27
HMGA1-205ENST00000447654 MRPL22Q9NWU5 206 aaKnown RBP16.75■□□□□ 0.27
HMGA1-205ENST00000447654 RCL1Q9Y2P8 373 aaKnown RBP16.75■□□□□ 0.27
HMGA1-205ENST00000447654 CLDN16Q9Y5I7 305 aa16.75■□□□□ 0.27
HMGA1-205ENST00000447654 H0YGG7 62 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 CCL25O15444 150 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 RAD51DO75771 328 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 CSTAP01040 98 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 OPN1LWP04000 364 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 MDKP21741 143 aaPredicted RBP16.74■□□□□ 0.27
HMGA1-205ENST00000447654 ARF3P61204 181 aaPredicted RBP16.74■□□□□ 0.27
HMGA1-205ENST00000447654 UBE2V1Q13404 147 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 CMTM1Q8IZ96 169 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 ZNF248Q8NDW4 579 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 SLC37A2Q8TED4 501 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 C18orf12Q96KH6 178 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 TMEM59Q9BXS4 323 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 WWTR1Q9GZV5 400 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 OR6C3Q9NZP0 311 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 SERINC4A6NH21 518 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 SCDO00767 359 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 SOCS1O15524 211 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 XRCC2O43543 280 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 HRASP01112 189 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 ZNF93P35789 620 aaPredicted RBP16.74■□□□□ 0.27
HMGA1-205ENST00000447654 YPEL5P62699 121 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 PLEKHF2Q9H8W4 249 aa16.74■□□□□ 0.27
HMGA1-205ENST00000447654 IGLV1-36A0A0B4J1U3 117 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 SDCBPO00560 298 aaPredicted RBP16.73■□□□□ 0.27
HMGA1-205ENST00000447654 GPR75O95800 540 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 SRP14P37108 136 aaKnown RBP16.73■□□□□ 0.27
HMGA1-205ENST00000447654 GALR1P47211 349 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 PAFAH1B2P68402 229 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 ZNF92Q03936 586 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 EXOSC7Q15024 291 aaKnown RBP16.73■□□□□ 0.27
HMGA1-205ENST00000447654 CYP2G1PQ6ZSU1 146 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 FAM89BQ8N5H3 189 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 NUDT10Q8NFP7 164 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 RLN3Q8WXF3 142 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 RELTQ969Z4 430 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 ALKBH3Q96Q83 286 aaPredicted RBP16.73■□□□□ 0.27
HMGA1-205ENST00000447654 NAA60Q9H7X0 242 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 CALHM2Q9HA72 323 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 SEPSECSQ9HD40 501 aaKnown RBP16.73■□□□□ 0.27
HMGA1-205ENST00000447654 GLRX2Q9NS18 164 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 FUT9Q9Y231 359 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 HS3ST3A1Q9Y663 406 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 VPS13AQ96RL7 3174 aa16.73■□□□□ 0.27
HMGA1-205ENST00000447654 PRSS37A4D1T9 235 aa16.72■□□□□ 0.27
HMGA1-205ENST00000447654 SERPINE3A8MV23 424 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms