RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 OR2B6P58173 313 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 UBE2IP63279 158 aaKnown RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 KCNJ8Q15842 424 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 ZNF79Q15937 498 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 ZNF239Q16600 458 aaKnown RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 ALKBH6Q3KRA9 238 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 PYDC2Q56P42 97 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 TRIQKQ629K1 86 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 RPL13AP3Q6NVV1 102 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 ZNF544Q6NX49 715 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 FAAP20Q6NZ36 180 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 SMARCD3Q6STE5 483 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 ZNF322Q6U7Q0 402 aaPredicted RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 DGAT2L6Q6ZPD8 337 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 NCCRP1Q6ZVX7 275 aaPredicted RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 RAB43Q86YS6 212 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 GID4Q8IVV7 300 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 DEFB119Q8N690 84 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 ACBD7Q8N6N7 88 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 ATP6V1C2Q8NEY4 427 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 BPIFCQ8NFQ6 507 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 OR10H4Q8NGA5 316 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 OR52N1Q8NH53 320 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 OR51A7Q8NH64 312 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 NEIL3Q8TAT5 605 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 SLC37A2Q8TED4 501 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 PAQR8Q8TEZ7 354 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 HAVCR1Q96D42 359 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 DIRAS2Q96HU8 199 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 SEC22AQ96IW7 307 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 TBX5Q99593 518 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 VGLL1Q99990 258 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 C20orf24Q9BUV8 137 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 OR51V1Q9H2C8 321 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 RBKSQ9H477 322 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 C8orf33Q9H7E9 229 aaPredicted RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 GEMIN7Q9H840 131 aaKnown RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 NIPAL2Q9H841 368 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 ISG20L2Q9H9L3 353 aaKnown RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 FOLH1BQ9HBA9 442 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 FAM60AQ9NP50 221 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 PRTFDC1Q9NRG1 225 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 C14orf105Q9NVL8 296 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 B3GNT2Q9NY97 397 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 DPM3Q9P2X0 92 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 SPRR3Q9UBC9 169 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 COMMD3Q9UBI1 195 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 NDRG2Q9UN36 371 aaKnown RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 STARD10Q9Y365 291 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 RBMX2Q9Y388 322 aaKnown RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 MTCL1Q9Y4B5 1905 aaKnown RBP3.19□□□□□ -1.9
VPS29-202ENST00000447578 KIAA1549LQ6ZVL6 1849 aa3.19□□□□□ -1.9
VPS29-202ENST00000447578 ANKRD12Q6UB98 2062 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 TRAV27A0A087WT01 109 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 A0A1B0GWA3 101 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 FRG2CA6NGY1 282 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 RIIAD1A6NNX1 92 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 C12orf71A8MTZ7 269 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 J3QLW9 94 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 J3QRE1 110 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 HSD17B6O14756 317 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 POLR1CO15160 346 aaPredicted RBP3.18□□□□□ -1.9
VPS29-202ENST00000447578 CHP2O43745 196 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 CCNKO75909 580 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 KBTBD11O94819 623 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 RCBTB2O95199 551 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 TMEM50AO95807 157 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 IFNGP01579 166 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 IGKV1D-16P01601 117 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 HLA-DPB1P04440 258 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 IGHV4-34P06331 123 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 CSF3P09919 207 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 SLC35E2P0CK97 266 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 OR8G3PP0DMU2 310 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 PGAM2P15259 253 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ABOP16442 354 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ZNF19P17023 458 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ZNF3P17036 446 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 CALCRP30988 508 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 DDOSTP39656 456 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 INPP1P49441 399 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 FXYD6P3P58550 94 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 PPP3R1P63098 170 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 PAX2Q02962 417 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 SCRN3Q0VDG4 424 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 STX4Q12846 297 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 FZD2Q14332 565 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 INSL4Q14641 139 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ZNHIT3Q15649 155 aaPredicted RBP3.18□□□□□ -1.9
VPS29-202ENST00000447578 NNATQ16517 81 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 NDUFAF6Q330K2 333 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 GLYR1Q49A26 553 aaPredicted RBP3.18□□□□□ -1.9
VPS29-202ENST00000447578 SLC22A6Q4U2R8 563 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 IDNKQ5T6J7 187 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 UFSP1Q6NVU6 142 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 ZNF343Q6P1L6 599 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 CNIH2Q6PI25 160 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 XKRXQ6PP77 449 aa3.18□□□□□ -1.9
VPS29-202ENST00000447578 CD200R1LQ6Q8B3 271 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms