RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 GRK1Q15835 563 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 RAB11BQ15907 218 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 RNF144BQ7Z419 303 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 C1QL2Q7Z5L3 287 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 LRRTM1Q86UE6 522 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 FAM185AQ8N0U4 392 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 OR8H2Q8N162 312 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 KCTD7Q96MP8 289 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 CHCHD6Q9BRQ6 235 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 DCTN5Q9BTE1 182 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 SPACA1Q9HBV2 294 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 MMP26Q9NRE1 261 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 ONECUT1Q9UBC0 465 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 AK6Q9Y3D8 172 aaKnown RBP11.69□□□□□ -0.54
SSBP3-208ENST00000444533 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-208ENST00000444533 A0A1B0GW55 424 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 MGST3O14880 152 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 CRLF1O75462 422 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 OR7C1O76099 320 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-208ENST00000444533 TFF1P04155 84 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 DUX4L2P0CJ85 424 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 DUX4L3P0CJ86 424 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 DUX4L4P0CJ87 422 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 DUX4L5P0CJ88 424 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 DUX4L6P0CJ89 424 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 DUX4L7P0CJ90 424 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 SELLP14151 372 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 JUNBP17275 347 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-208ENST00000444533 AMY2BP19961 511 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 RAB3BP20337 219 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 RBM11P57052 281 aaKnown RBP11.68□□□□□ -0.54
SSBP3-208ENST00000444533 MPV17LQ2QL34 196 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 NHLRC3Q5JS37 347 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 DUX4L9Q6RFH8 374 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-208ENST00000444533 GDPGP1Q6ZNW5 385 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 TPRA1Q86W33 373 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 OR4D6Q8NGJ1 314 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 OR51T1Q8NGJ9 327 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 KCNG3Q8TAE7 436 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 NKX3-1Q99801 234 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-208ENST00000444533 PPIL3Q9H2H8 161 aaKnown RBP11.68□□□□□ -0.54
SSBP3-208ENST00000444533 TXNL4BQ9NX01 149 aaKnown RBP11.68□□□□□ -0.54
SSBP3-208ENST00000444533 IL36RNQ9UBH0 155 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 DUX4Q9UBX2 424 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 MALRD1Q5VYJ5 2156 aa11.68□□□□□ -0.54
SSBP3-208ENST00000444533 DOCK11Q5JSL3 2073 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 hADV38S2A0JD32 116 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 C22orf46C9J442 243 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 SLC17A2O00624 439 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 TOX4O94842 621 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 BPNT1O95861 308 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 IFNA2P01563 188 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 ARSBP15848 533 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 ADRA2CP18825 462 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 KCNJ3P48549 501 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 PAX8Q06710 450 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 EDDM3AQ14507 147 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 FAM189A2Q15884 450 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 PIGYQ3MUY2 71 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 PAN3Q58A45 887 aaKnown RBP11.67□□□□□ -0.54
SSBP3-208ENST00000444533 C1orf100Q5SVJ3 147 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 ATAD3CQ5T2N8 411 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 CRIP3Q6Q6R5 217 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 KIR3DL3Q8N743 410 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 Q8NFD4 153 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 C8orf46Q8TAG6 207 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 NEK7Q8TDX7 302 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 URM1Q9BTM9 101 aaKnown RBP11.67□□□□□ -0.54
SSBP3-208ENST00000444533 TMPRSS13Q9BYE2 586 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 BARHL1Q9BZE3 327 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 SELENOIQ9C0D9 397 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 CHST6Q9GZX3 395 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 KPTNQ9Y664 436 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
SSBP3-208ENST00000444533 SLC22A1O15245 554 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 AIREO43918 545 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 MGMTP16455 207 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 GADD45AP24522 165 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 LMO1P25800 156 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 ARF6P62330 175 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 MEF2CQ06413 473 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-208ENST00000444533 RBM39Q14498 530 aaKnown RBP11.66□□□□□ -0.54
SSBP3-208ENST00000444533 PDCD1Q15116 288 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 GPR157Q5UAW9 335 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 OR4M1Q8NGD0 313 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 POM121Q96HA1 1249 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 WDFY2Q96P53 400 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 PCGF1Q9BSM1 259 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 TMEM59Q9BXS4 323 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 OR51E2Q9H255 320 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 PPA2Q9H2U2 334 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 STEAP1Q9UHE8 339 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
SSBP3-208ENST00000444533 ZANQ9Y493 2812 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 TRGV10A0A0A0MS01 117 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 A0A0G2JK05 382 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A10PA6NDY2 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A18PA6NE21 464 aa11.65□□□□□ -0.54
SSBP3-208ENST00000444533 FAM90A16PA6NEW6 464 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms