RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 OR8G5Q8NG78 346 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 TERB2Q8NHR7 220 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 NKX2-6A6NCS4 301 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 ERVH48-1M5A8F1 160 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 SHOXO15266 292 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 CLPSP04118 112 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 IGHV1-2P23083 117 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 CHATP28329 748 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 GLRXP35754 106 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 CEACAM3P40198 252 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 GNB1P62873 340 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 PDZK1IP1Q13113 114 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 FYTTD1Q96QD9 318 aaKnown RBP12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 COL4A4P53420 1690 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 TRIM64BA6NI03 449 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 MT-CO2P00403 227 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 BCL3P20749 454 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 RHOUQ7L0Q8 258 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 CMTM3Q96MX0 182 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 PRDM14Q9GZV8 571 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 LIN7CQ9NUP9 197 aaKnown RBP12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 CD3DP04234 171 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 APOBEC3AP31941 199 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 TIMP3P35625 211 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 SIGIRRQ6IA17 410 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 LYG1Q8N1E2 194 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 OR51A4Q8NGJ6 313 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 SCMH1Q96GD3 660 aa12.23□□□□□ -0.45
SMARCA4-204ENST00000444061 J3QW42 95 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 KLF4O43474 513 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 CECR9P0C854 216 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 KIR3DL2P43630 455 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 OR3A1P47881 315 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 H3F3CQ6NXT2 135 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 S100A7AQ86SG5 101 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 BCL2L2Q92843 193 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 BARX1Q9HBU1 254 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 IL19Q9UHD0 177 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 PCNX1Q96RV3 2341 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 SMPD2O60906 423 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 TPPPO94811 219 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 GIPP09681 153 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 CD80P33681 288 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 CCL19Q99731 98 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 HEXA-AS1Q9H8Q6 139 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 IFNL4K9M1U5 179 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 M0R1X1 148 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 NANOS3P60323 173 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 CTF1Q16619 201 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 CEACAM21Q3KPI0 293 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 RFLNBQ8N5W9 214 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 CA10Q9NS85 328 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 IGHV3OR15-7A0A075B7D8 119 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 A0A1W2PRD5 423 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 A0A1W2PRF3 423 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 A0A1W2PRM7 423 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 RFPL4AA6NLU0 287 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 RFPL4AL1F8VTS6 287 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 HNF1AP20823 631 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 RFX2P48378 723 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 P2RX3P56373 397 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 RAB11AP62491 216 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 SSBP1Q04837 148 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 IAH1Q2TAA2 248 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 NRN1LQ496H8 165 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 ST6GALNAC3Q8NDV1 305 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 PLEKHA3Q9HB20 300 aa12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 AMMECR1Q9Y4X0 333 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-204ENST00000444061 DEFB108AA8MXU0 73 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 ST8SIA5O15466 376 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 SSX5O60225 188 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 NPIPB7O75200 414 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 MPV17LQ2QL34 196 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 LINC01590Q5TEZ4 76 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 RBMXL3Q8N7X1 1067 aaKnown RBP12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 RNF141Q8WVD5 230 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 COMMD5Q9GZQ3 224 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 SORDQ00796 357 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 TESK1Q15569 626 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 ZDHHC11Q9H8X9 412 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 RNF122Q9H9V4 155 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 S100A7P31151 101 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 CEACAM6P40199 344 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 PTGDSP41222 190 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 GUCA2AQ02747 115 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 FBXO7Q9Y3I1 522 aa12.21□□□□□ -0.45
SMARCA4-204ENST00000444061 TNFSF12O43508 249 aa12.21□□□□□ -0.46
SMARCA4-204ENST00000444061 RAB7AP51149 207 aa12.21□□□□□ -0.46
SMARCA4-204ENST00000444061 BSPH1Q075Z2 132 aa12.21□□□□□ -0.46
SMARCA4-204ENST00000444061 ZBTB37Q5TC79 503 aa12.21□□□□□ -0.46
SMARCA4-204ENST00000444061 PXDC1Q5TGL8 231 aa12.21□□□□□ -0.46
SMARCA4-204ENST00000444061 ABCA4P78363 2273 aa12.21□□□□□ -0.46
SMARCA4-204ENST00000444061 TRAV8-7A0A075B6U6 113 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 NAT2P11245 290 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 SCGB2A2Q13296 93 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 DYRK1AQ13627 763 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 OR52W1Q6IF63 320 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 DOLPP1Q86YN1 238 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms