RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 GABRA5P31644 462 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 GTF2A1P52655 376 aaPredicted RBP16.3■□□□□ 0.2
LRCH3-208ENST00000443727 KISS1Q15726 138 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 PLA1AQ53H76 456 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 SLC35E4Q6ICL7 350 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 RNF144BQ7Z419 303 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 LHFPL4Q7Z7J7 247 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 SAXO1Q8IYX7 474 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 PARP16Q8N5Y8 322 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 CNIH3Q8TBE1 160 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 FOXRED1Q96CU9 486 aaPredicted RBP16.3■□□□□ 0.2
LRCH3-208ENST00000443727 CPNE2Q96FN4 548 aaPredicted RBP16.3■□□□□ 0.2
LRCH3-208ENST00000443727 RHOFQ9HBH0 211 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 TCF7L1Q9HCS4 588 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 C8orf4Q9NR00 106 aa16.3■□□□□ 0.2
LRCH3-208ENST00000443727 FUOMA2VDF0 154 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 TIMM23O14925 209 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 TSPAN9O75954 239 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 CLPXO76031 633 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 CLIC3O95833 236 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 MYL12AP19105 171 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 RAB3AP20336 220 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 OR3A1P47881 315 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 SOX2P48431 317 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 ETV1P50549 477 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 P2RX3P56373 397 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 PROK1P58294 105 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 ZNF691Q5VV52 312 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 TTC23Q5W5X9 447 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 SATL1Q86VE3 508 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 SETD9Q8NE22 299 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 OR4C13Q8NGP0 309 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 GPER1Q99527 375 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 ABCB10Q9NRK6 738 aa16.29■□□□□ 0.2
LRCH3-208ENST00000443727 TBL2Q9Y4P3 447 aaKnown RBP16.29■□□□□ 0.2
LRCH3-208ENST00000443727 ALX3O95076 343 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 CD2P06729 351 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 ERP29P30040 261 aaKnown RBP16.28■□□□□ 0.2
LRCH3-208ENST00000443727 KRTAP10-3P60369 221 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 RCN1Q15293 331 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 FAM189A2Q15884 450 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 SSX2Q16385 188 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 CCDC58Q4VC31 144 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 RPL22L1Q6P5R6 122 aaKnown RBP16.28■□□□□ 0.2
LRCH3-208ENST00000443727 TCF23Q7RTU1 214 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 PACRGLQ8N7B6 248 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 OR11H6Q8NGC7 330 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 GPR148Q8TDV2 347 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 JAM3Q9BX67 310 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 CHCHD3Q9NX63 227 aaKnown RBP16.28■□□□□ 0.2
LRCH3-208ENST00000443727 SESN1Q9Y6P5 492 aa16.28■□□□□ 0.2
LRCH3-208ENST00000443727 TRGV10A0A0A0MS01 117 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 ODF3BA8MYP8 253 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 DEGS1O15121 323 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 IL18R1Q13478 541 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 MED21Q13503 144 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 ZNF626Q68DY1 528 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 LIAT1Q6ZQX7 453 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 DHRSXQ8N5I4 330 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 MALSU1Q96EH3 234 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 GAL3ST2Q9H3Q3 398 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 ING3Q9NXR8 418 aa16.27■□□□□ 0.2
LRCH3-208ENST00000443727 UBE2J1Q9Y385 318 aaPredicted RBP16.27■□□□□ 0.2
LRCH3-208ENST00000443727 EXOSC1Q9Y3B2 195 aaKnown RBP16.27■□□□□ 0.2
LRCH3-208ENST00000443727 TRRAPQ9Y4A5 3859 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 FAM90A8PA6NJQ4 464 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 ZP1P60852 638 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 AESQ08117 197 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 CDK5R1Q15078 307 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 OR2G6Q5TZ20 316 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 CHST4Q8NCG5 386 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 NDNFQ8TB73 568 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 TNFAIP8L1Q8WVP5 186 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 NR1H4Q96RI1 486 aaPredicted RBP16.26■□□□□ 0.19
LRCH3-208ENST00000443727 NKX3-1Q99801 234 aaPredicted RBP16.26■□□□□ 0.19
LRCH3-208ENST00000443727 NPFFR1Q9GZQ6 430 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 FAM192AQ9GZU8 254 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 TMEM133Q9H2Q1 129 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 TAS2R4Q9NYW5 299 aa16.26■□□□□ 0.19
LRCH3-208ENST00000443727 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.26■□□□□ 0.19
LRCH3-208ENST00000443727 IGHV2-26A0A0B4J1V2 119 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 A0A0G2JK05 382 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 VGLL3A8MV65 326 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 MTNR1BP49286 362 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 RAB13P51153 203 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 PPP3R1P63098 170 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 RSU1Q15404 277 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 XAF1Q6GPH4 301 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 ASPHD2Q6ICH7 369 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 DYNAPQ8N1N2 210 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 OR2T6Q8NHC8 308 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 RPS4Y2Q8TD47 263 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 RGP1Q92546 391 aaPredicted RBP16.25■□□□□ 0.19
LRCH3-208ENST00000443727 TMEM80Q96HE8 168 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 CLEC7AQ9BXN2 247 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 BABAM2Q9NXR7 383 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 FBLN5Q9UBX5 448 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 DIMT1Q9UNQ2 313 aaKnown RBP16.25■□□□□ 0.19
LRCH3-208ENST00000443727 HILPDAQ9Y5L2 63 aa16.25■□□□□ 0.19
LRCH3-208ENST00000443727 LMO1P25800 156 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms