RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CALCBP10092 127 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 CD28P10747 220 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 ZNF44P15621 663 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 ERP29P30040 261 aaKnown RBP9.49□□□□□ -0.89
TTC28-203ENST00000442232 NPBWR2P48146 333 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 ISL1P61371 349 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 PDZK1IP1Q13113 114 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 KPNB1Q14974 876 aaKnown RBP9.49□□□□□ -0.89
TTC28-203ENST00000442232 HIST2H2BDQ6DRA6 164 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 CCBE1Q6UXH8 406 aaPredicted RBP9.49□□□□□ -0.89
TTC28-203ENST00000442232 TCF23Q7RTU1 214 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 C16orf82Q7Z2V1 217 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 REC114Q7Z4M0 266 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 RTN4RL2Q86UN3 420 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 LYG1Q8N1E2 194 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 OR13C9Q8NGT0 318 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 RFT1Q96AA3 541 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 CPNE2Q96FN4 548 aaPredicted RBP9.49□□□□□ -0.89
TTC28-203ENST00000442232 OR5M11Q96RB7 305 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 RHOFQ9HBH0 211 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 HMG20AQ9NP66 347 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 KIAA2026Q5HYC2 2103 aa9.49□□□□□ -0.89
TTC28-203ENST00000442232 PRKDCP78527 4128 aaKnown RBP9.48□□□□□ -0.89
TTC28-203ENST00000442232 IGKV1-9A0A0C4DH69 117 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 J3QLW9 94 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 TOR1AO14656 332 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 PSPNO60542 156 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 OR2H2O95918 312 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 HCKP08631 526 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 ZNF19P17023 458 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 CEACAM3P40198 252 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 PTGFRP43088 359 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 OR3A1P47881 315 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 CCR9P51686 369 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 SNRPGP62308 76 aaKnown RBP9.48□□□□□ -0.89
TTC28-203ENST00000442232 SCN1BQ07699 218 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 PRAMEF5Q5TYX0 476 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 FDX2Q6P4F2 183 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 ACBD7Q8N6N7 88 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 CHST4Q8NCG5 386 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 OR52N4Q8NGI2 321 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 OR4D6Q8NGJ1 314 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 OR5D18Q8NGL1 313 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 PYDC1Q8WXC3 89 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 STMN2Q93045 179 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 CREB3L1Q96BA8 519 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 HRASLS5Q96KN8 279 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 C4orf36Q96KX1 117 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 MBOAT4Q96T53 435 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 SERTAD4Q9NUC0 356 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 TAS2R3Q9NYW6 316 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 FRRS1LQ9P0K9 344 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 DPM3Q9P2X0 92 aa9.48□□□□□ -0.89
TTC28-203ENST00000442232 LEUTXA8MZ59 168 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 EI24O14681 340 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 PIN1P1O15428 100 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 MT-ND2P03891 347 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 ALPLP05186 524 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 PF4V1P10720 104 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 CDK2P24941 298 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 MNDAP41218 407 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 ALDH3A2P51648 485 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 MRPL28Q13084 256 aaKnown RBP9.47□□□□□ -0.89
TTC28-203ENST00000442232 ZIK1Q3SY52 487 aaPredicted RBP9.47□□□□□ -0.89
TTC28-203ENST00000442232 SLC25A30Q5SVS4 291 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 CCDC144NLQ6NUI1 221 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 ZFP1Q6P2D0 407 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 SAXO1Q8IYX7 474 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 ABHD12Q8N2K0 398 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 TSEN15Q8WW01 171 aaKnown RBP9.47□□□□□ -0.89
TTC28-203ENST00000442232 CITED2Q99967 270 aaPredicted RBP9.47□□□□□ -0.89
TTC28-203ENST00000442232 COMMD4Q9H0A8 199 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 ZCCHC4Q9H5U6 513 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 ING3Q9NXR8 418 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 FAM53CQ9NYF3 392 aa9.47□□□□□ -0.89
TTC28-203ENST00000442232 A0A1W2PRX2 142 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 TMEM212A6NML5 194 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 MAGEB3O15480 346 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 MPZL2O60487 215 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 KDM4BO94953 1096 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 CCDC159P0C7I6 412 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 TMEM225BP0DP42 221 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 DBTP11182 482 aaKnown RBP9.46□□□□□ -0.9
TTC28-203ENST00000442232 CD33P20138 364 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 PRRX1P54821 245 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 NANOS3P60323 173 aaKnown RBP9.46□□□□□ -0.9
TTC28-203ENST00000442232 BDH1Q02338 343 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 AESQ08117 197 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 ALKBH1Q13686 389 aaKnown RBP9.46□□□□□ -0.9
TTC28-203ENST00000442232 RBM39Q14498 530 aaKnown RBP9.46□□□□□ -0.9
TTC28-203ENST00000442232 TMEM95Q3KNT9 176 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 KRBOX4Q5JUW0 171 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 LDLRAD2Q5SZI1 272 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 KPRPQ5T749 579 aaPredicted RBP9.46□□□□□ -0.9
TTC28-203ENST00000442232 HEPN1Q6WQI6 88 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 C10orf67Q8IYJ2 551 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 OR51A4Q8NGJ6 313 aa9.46□□□□□ -0.9
TTC28-203ENST00000442232 OR5D14Q8NGL3 314 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms