RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TCF7L1Q9HCS4 588 aa12.38□□□□□ -0.43
CSNK1E-210ENST00000442216 ONECUT1Q9UBC0 465 aa12.38□□□□□ -0.43
CSNK1E-210ENST00000442216 IL36RNQ9UBH0 155 aa12.38□□□□□ -0.43
CSNK1E-210ENST00000442216 SF3B6Q9Y3B4 125 aaKnown RBP12.38□□□□□ -0.43
CSNK1E-210ENST00000442216 TMEM82A0PJX8 343 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 MAGEA13PA6NCF6 341 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 MGST3O14880 152 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 OR2H2O95918 312 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 MAS1P04201 325 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 UCHL1P09936 223 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 SRMP19623 302 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 ERP29P30040 261 aaKnown RBP12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 GABRA5P31644 462 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 OR3A4PP47883 348 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 MEF2CQ06413 473 aaPredicted RBP12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 NHLRC3Q5JS37 347 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 UBE2UQ5VVX9 321 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 Q6P435 159 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 CEACAM19Q7Z692 300 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 LYPD6Q86Y78 171 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 SPARTQ8N0X7 666 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 BPIFB2Q8N4F0 458 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 FOXRED1Q96CU9 486 aaPredicted RBP12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 JMJD8Q96S16 334 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 UQCC2Q9BRT2 126 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 MS4A7Q9GZW8 240 aaPredicted RBP12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 OCEL1Q9H607 264 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 C19orf12Q9NSK7 152 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 ZNF69Q9UC07 566 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 ING4Q9UNL4 249 aa12.37□□□□□ -0.43
CSNK1E-210ENST00000442216 CENPVL3A0A0U1RRI6 287 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 hCG_1809904A0A1W2PP81 198 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 A0A1W2PPE2 198 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 A0A1W2PR64 198 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 A0A1W2PRV1 198 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 FUOMA2VDF0 154 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 PSPNO60542 156 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 ARL6IP5O75915 188 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 RGS9O75916 674 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 HTR3BO95264 441 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 CSTBP04080 98 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 CSN2P05814 226 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 CALCBP10092 127 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 GABRR1P24046 479 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 DUSP1P28562 367 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 GP2P55259 537 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 GUCA2AQ02747 115 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 INSL4Q14641 139 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 KCTD21Q4G0X4 260 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 HSD17B12Q53GQ0 312 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 TMEM200BQ69YZ2 307 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 TMEM91Q6ZNR0 172 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 VMO1Q7Z5L0 202 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 LINC00596Q86U02 117 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 FAM185AQ8N0U4 392 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 JAGN1Q8N5M9 183 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 Q8N7P7 452 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 MRPS24Q96EL2 167 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 SLITRK2Q9H156 845 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 METTL8Q9H825 291 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 GHRLQ9UBU3 117 aa12.36□□□□□ -0.43
CSNK1E-210ENST00000442216 A0A0G2JK05 382 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 DEGS1O15121 323 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 CDRT1O95170 752 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 CD37P11049 281 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 ZNF44P15621 663 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 GALP22466 123 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 PRTN3P24158 256 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 OR3A1P47881 315 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 SNU13P55769 128 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 HILS1P60008 231 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 RPS25P62851 125 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 GRK1Q15835 563 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 GLT8D1Q68CQ7 371 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 NCR3LG1Q68D85 454 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 ZNF773Q6PK81 442 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 OSR2Q8N2R0 312 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 OR4S1Q8NGB4 309 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 TMEM203Q969S6 136 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 SLC6A7Q99884 636 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 IFT22Q9H7X7 185 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 NDUFB11Q9NX14 153 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 MRPS28Q9Y2Q9 187 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 KIAA2026Q5HYC2 2103 aa12.35□□□□□ -0.43
CSNK1E-210ENST00000442216 IGHV1-69DA0A0B4J2H0 117 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 hADV38S2A0JD32 116 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 SIRPB1O00241 398 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 SLC33A1O00400 549 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 IGHV1-69P01742 117 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 RBP4P02753 201 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 GTF2F2P13984 249 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 KCNJ3P48549 501 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 EDDM3BP56851 147 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 RBM11P57052 281 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 SSX1Q16384 188 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 FAM27D1Q5T7N8 215 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 AWAT2Q6E213 333 aa12.34□□□□□ -0.43
CSNK1E-210ENST00000442216 CD200R1LQ6Q8B3 271 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms