RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PNMTP11086 282 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 FGF5P12034 268 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 SPINK2P20155 84 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 SPSB3Q6PJ21 355 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 ZNF283Q8N7M2 679 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 LFNGQ8NES3 379 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 OR5R1Q8NH85 324 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 SLAMF6Q96DU3 332 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 GINS3Q9BRX5 216 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 CALHM2Q9HA72 323 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 PATZ1Q9HBE1 687 aaKnown RBP6.59□□□□□ -1.35
HDAC9-214ENST00000441542 DNAJC4Q9NNZ3 241 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 PRTFDC1Q9NRG1 225 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 FOXJ2Q9P0K8 574 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 MYOTQ9UBF9 498 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 NPIPA1Q9UND3 350 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 SRPK3Q9UPE1 567 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 RP1P56715 2156 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 SHANK1Q9Y566 2161 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 IGSF23A1L1A6 192 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 C5orf63A6NC05 138 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 NKX2-6A6NCS4 301 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 DVL1O14640 695 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 KAT7O95251 611 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 ZNF728P0DKX0 622 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 LYL1P12980 280 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 CEBPBP17676 345 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 HNF1AP20823 631 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 AKT2P31751 481 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 DYNLT3P51808 116 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 FAM3BP58499 235 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-214ENST00000441542 RPS16P62249 146 aaKnown RBP6.59□□□□□ -1.35
HDAC9-214ENST00000441542 IL15RAQ13261 267 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 IZUMO4Q1ZYL8 232 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 CXorf66Q5JRM2 361 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-214ENST00000441542 RIPPLY2Q5TAB7 128 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 C16orf47Q6ZP98 133 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-214ENST00000441542 C16orf82Q7Z2V1 217 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 WDFY1Q8IWB7 410 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 KCNG3Q8TAE7 436 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 TSLPQ969D9 159 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 VSTM2LQ96N03 204 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 CLUHP3Q96NS8 147 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 CDCA3Q99618 268 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-214ENST00000441542 RSG1Q9BU20 258 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 SOHLH2Q9NX45 425 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 MCTS1Q9ULC4 181 aaKnown RBP6.59□□□□□ -1.35
HDAC9-214ENST00000441542 VDAC3Q9Y277 283 aa6.59□□□□□ -1.35
HDAC9-214ENST00000441542 IGLV1-36A0A0B4J1U3 117 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 FIGNL2A6NMB9 653 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 FCGR2AP12318 317 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 MSX1P28360 303 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 SFTPDP35247 375 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 TNFSF10P50591 281 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 HSD11B2P80365 405 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 TMEM267Q0VDI3 215 aaPredicted RBP6.59□□□□□ -1.36
HDAC9-214ENST00000441542 TRIM61Q5EBN2 209 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 LYPD6BQ8NI32 183 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 OR1E3Q8WZA6 343 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 GPX7Q96SL4 187 aaPredicted RBP6.59□□□□□ -1.36
HDAC9-214ENST00000441542 TBL1XR1Q9BZK7 514 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 FAM60AQ9NP50 221 aa6.59□□□□□ -1.36
HDAC9-214ENST00000441542 MYO15AQ9UKN7 3530 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 GRIFINA4D1Z8 144 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 F5H5K5 113 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 J3QW42 95 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 HSPA12AO43301 675 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 SLC35E2P0CK97 266 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 LMO1P25800 156 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 GNRHRP30968 328 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 TAS2R46P59540 309 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 C1orf61Q13536 156 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 VAX1Q5SQQ9 334 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 ZNF774Q6NX45 483 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 ZNF100Q8IYN0 542 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 TMEM256Q8N2U0 113 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 OR2C3Q8N628 320 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 NEK7Q8TDX7 302 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 TMEM171Q8WVE6 324 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 C11orf40Q8WZ69 217 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 TMEM18Q96B42 140 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 RSPRY1Q96DX4 576 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 MMABQ96EY8 250 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-214ENST00000441542 OR5B12Q96R08 314 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 SMIM7Q9BQ49 75 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 LIME1Q9H400 295 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 ASCL3Q9NQ33 180 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 WNT16Q9UBV4 365 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 ZNF107Q9UII5 783 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-214ENST00000441542 DKKL1Q9UK85 242 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 KIAA2026Q5HYC2 2103 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 TMEM14DPA8MWL7 114 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 H7BYZ3 331 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 CHRM2P08172 466 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 CYC1P08574 325 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 GP1BBP13224 206 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 FSTP19883 344 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 TBPP20226 339 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 ZNF117Q03924 483 aa6.58□□□□□ -1.36
HDAC9-214ENST00000441542 GPM6BQ13491 265 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms