RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SIRPB1O00241 398 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 COMPP49747 757 aaPredicted RBP19.32■□□□□ 0.68
VARS-217ENST00000440048 DLX6P56179 175 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 ERVFRD-1P60508 538 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 PPP3R1P63098 170 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 Q499Y3 187 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 RNLSQ5VYX0 342 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 IZUMO2Q6UXV1 221 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 PXT1Q8NFP0 134 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 OR4S1Q8NGB4 309 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 TNFAIP8L1Q8WVP5 186 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 SGCDQ92629 289 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 MYDGFQ969H8 173 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 NKX3-1Q99801 234 aaPredicted RBP19.32■□□□□ 0.68
VARS-217ENST00000440048 ANKRD60Q9BZ19 345 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 TMEM138Q9NPI0 162 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 TNFRSF19Q9NS68 423 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 PAK1IP1Q9NWT1 392 aaPredicted RBP19.32■□□□□ 0.68
VARS-217ENST00000440048 FAM96BQ9Y3D0 163 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 PCDHGB5Q9Y5G0 923 aa19.32■□□□□ 0.68
VARS-217ENST00000440048 MEX3AA1L020 520 aaKnown RBP19.31■□□□□ 0.68
VARS-217ENST00000440048 OR2H2O95918 312 aa19.31■□□□□ 0.68
VARS-217ENST00000440048 HKR1P10072 659 aa19.31■□□□□ 0.68
VARS-217ENST00000440048 IGFBP3P17936 291 aaPredicted RBP19.31■□□□□ 0.68
VARS-217ENST00000440048 CELP19835 753 aa19.31■□□□□ 0.68
VARS-217ENST00000440048 OR3A1P47881 315 aa19.31■□□□□ 0.68
VARS-217ENST00000440048 C16orf87Q6PH81 154 aa19.31■□□□□ 0.68
VARS-217ENST00000440048 MND1Q9BWT6 205 aa19.31■□□□□ 0.68
VARS-217ENST00000440048 CDCA4Q9BXL8 241 aa19.31■□□□□ 0.68
VARS-217ENST00000440048 SF3B6Q9Y3B4 125 aaKnown RBP19.31■□□□□ 0.68
VARS-217ENST00000440048 TRBV5-7A0A0A0MS05 114 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 hCG_1809904A0A1W2PP81 198 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 A0A1W2PPE2 198 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 A0A1W2PR64 198 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 A0A1W2PRV1 198 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 MEIOCA2RUB1 952 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 C17orf98A8MV24 154 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 MGST3O14880 152 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 GPX5O75715 221 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 CD1AP06126 327 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 BDKRB2P30411 391 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 SAA4P35542 130 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 MTNR1BP49286 362 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 SLC35A2P78381 396 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 MEF2CQ06413 473 aaPredicted RBP19.3■□□□□ 0.68
VARS-217ENST00000440048 ACSM1Q08AH1 577 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 DDI2Q5TDH0 399 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 ELP2Q6IA86 826 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 Q6P435 159 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 TCF23Q7RTU1 214 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 LDLRAD3Q86YD5 345 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 TMEM86BQ8N661 226 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 TPRX1Q8N7U7 411 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 PPP1R35Q8TAP8 253 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 SSMEM1Q8WWF3 244 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 OR14A2Q96R54 314 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 FAM192AQ9GZU8 254 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 KIAA2026Q5HYC2 2103 aa19.3■□□□□ 0.68
VARS-217ENST00000440048 ATP6V1G2O95670 118 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 FBP1P09467 338 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 ZNF728P0DKX0 622 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 LMO1P25800 156 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 OR3A4PP47883 348 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 HSPA13P48723 471 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 BMXP51813 675 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 SCN1BQ07699 218 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 RIPK1Q13546 671 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 ASCL4Q6XD76 172 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 CHIAQ9BZP6 476 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 HEXA-AS1Q9H8Q6 139 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 TPRKBQ9Y3C4 175 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 POMT1Q9Y6A1 747 aa19.29■□□□□ 0.68
VARS-217ENST00000440048 TRAV8-7A0A075B6U6 113 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 A0A0G2JK05 382 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 A0A1W2PPK0 400 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 hADV38S2A0JD32 116 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 IGHV4-59P01825 116 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 ZNF44P15621 663 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 ZNF93P35789 620 aaPredicted RBP19.28■□□□□ 0.68
VARS-217ENST00000440048 PTGFRP43088 359 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 IER3P46695 156 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 BDH1Q02338 343 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 ZNF782Q6ZMW2 699 aaPredicted RBP19.28■□□□□ 0.68
VARS-217ENST00000440048 OR10K1Q8NGX5 313 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 OR5M11Q96RB7 305 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 DUSP21Q9H596 190 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 CKLFQ9UBR5 152 aa19.28■□□□□ 0.68
VARS-217ENST00000440048 LSM2Q9Y333 95 aaKnown RBP19.28■□□□□ 0.68
VARS-217ENST00000440048 MAGEA13PA6NCF6 341 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 DEGS1O15121 323 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 FSTP19883 344 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 COX7A1P24310 79 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 ERP29P30040 261 aaKnown RBP19.27■□□□□ 0.68
VARS-217ENST00000440048 P2RX3P56373 397 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 IRF3Q14653 427 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 RSU1Q15404 277 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 MIDNQ504T8 468 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 AWAT1Q58HT5 328 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 CHST4Q8NCG5 386 aa19.27■□□□□ 0.68
VARS-217ENST00000440048 Q8NFD4 153 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms