RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 IGFBP7Q16270 282 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 LIAT1Q6ZQX7 453 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 SLAMF9Q96A28 289 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 MSI2Q96DH6 328 aaKnown RBP11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF286AQ9HBT8 521 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 GPR35Q9HC97 309 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 HSF4Q9ULV5 492 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 FBXO7Q9Y3I1 522 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 LRRC3CA6NJW4 275 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 NUDT19A8MXV4 375 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 E5RGE8 158 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 CA11O75493 328 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 HLA-HP01893 362 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 SRD5A2P31213 254 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 DVL1P1P54792 670 aaPredicted RBP11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 HERV-K104P61576 105 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 TRIM61Q5EBN2 209 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 Q6ZSR3 168 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 CPT1CQ8TCG5 803 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 PARP11Q9NR21 331 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 NSG2Q9Y328 171 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 FAM24AA6NFZ4 105 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 M0R036 132 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 TNFSF12O43508 249 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 PDCD6O75340 191 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 DTYMKP23919 212 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 ECI1P42126 302 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 GPM6AP51674 278 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 DAZAP2Q15038 168 aaPredicted RBP11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 ACER2Q5QJU3 275 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 AVPI1Q5T686 147 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 NEK7Q8TDX7 302 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 SF3B5Q9BWJ5 86 aaKnown RBP11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 HES7Q9BYE0 225 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 FAM212BQ9NTI7 297 aaPredicted RBP11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 NKX2-6A6NCS4 301 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 HAAOP46952 286 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 POLR2GP62487 172 aaKnown RBP eCLIP11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 TSC22D1Q15714 1073 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 PPP1R32Q7Z5V6 425 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 UBAC2Q8NBM4 344 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 OR56B2PQ8NGI1 322 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 OR2V1Q8NHB1 315 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 C12orf57Q99622 126 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 SPACA1Q9HBV2 294 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 SLC7A10Q9NS82 523 aa11.69□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF98A6NK75 572 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 COLCA2A8K830 154 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 FAM157AC9JC47 383 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 PPYP01298 95 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 SCTP09683 121 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 BCL3P20749 454 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 GLP1RP43220 463 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 FUT6P51993 359 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 RBM11P57052 281 aaKnown RBP11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 ZFP36L1Q07352 338 aaKnown RBP11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 SGCZQ96LD1 299 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 ABHD14AQ9BUJ0 271 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 CALHM2Q9HA72 323 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 CACFD1Q9UGQ2 172 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 C5orf49A4QMS7 147 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 TERTO14746 1132 aaKnown RBP11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 GPR37O15354 613 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 GAPDHP04406 335 aaKnown RBP11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 OR13C7P0DN81 318 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 CEBPGP53567 150 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 EIF3IQ13347 325 aaKnown RBP11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 GUK1Q16774 197 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 TMEM42Q69YG0 159 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 TCEAL6Q6IPX3 200 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 VASH2Q86V25 355 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 LGI3Q8N145 548 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 TMEM217Q8N7C4 229 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 TMEM105Q8N8V8 129 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 FAM213BQ8TBF2 198 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 CD300LFQ8TDQ1 290 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 TCEAL3Q969E4 200 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 GALNT14Q96FL9 552 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 C18orf12Q96KH6 178 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 PLEKHA2Q9HB19 425 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 TCFL5Q9UL49 500 aa11.68□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF816-ZNF321PA0A0X1KG74 233 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 NTN3O00634 580 aaPredicted RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 FUT3P21217 361 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 CXorf66Q5JRM2 361 aaPredicted RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 KRBOX4Q5JUW0 171 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 TIPARPQ7Z3E1 657 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 DMBX1Q8NFW5 382 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF488Q96MN9 340 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 SYT3Q9BQG1 590 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 PARPBPQ9NWS1 579 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 STARD10Q9Y365 291 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 NCKAP5O14513 1909 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 C3orf85A0A1B0GTC6 90 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 H7C1Q1 480 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 ARG1P05089 322 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 GNRHRP30968 328 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms